RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 MTHFD2LQ9H903 347 aaPredicted RBP12.18□□□□□ -0.46
SNX3-204ENST00000426155 MCCC2Q9HCC0 563 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 A4GALTQ9NPC4 353 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 ACER3Q9NUN7 267 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.18□□□□□ -0.46
SNX3-204ENST00000426155 ZNF443Q9Y2A4 671 aaPredicted RBP12.18□□□□□ -0.46
SNX3-204ENST00000426155 CHST2Q9Y4C5 530 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 CDHR4A6H8M9 788 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 GJE1A6NN92 205 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 MSTNO14793 375 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 FRS3O43559 492 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 SS18L1O75177 396 aaPredicted RBP12.17□□□□□ -0.46
SNX3-204ENST00000426155 PLGP00747 810 aaPredicted RBP12.17□□□□□ -0.46
SNX3-204ENST00000426155 TROVE2P10155 538 aaKnown RBP eCLIP12.17□□□□□ -0.46
SNX3-204ENST00000426155 BMP2P12643 396 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 PRG2P13727 222 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 ENPP1P22413 925 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 SLC7A1P30825 629 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 CCKARP32238 428 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 MAGEA8P43361 318 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 EEF1A1P68104 462 aaKnown RBP12.17□□□□□ -0.46
SNX3-204ENST00000426155 FAM27E3Q08E93 113 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 FADDQ13158 208 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 ZSCAN26Q16670 478 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 LIN52Q52LA3 116 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 PDSS1Q5T2R2 415 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 DHDDSQ86SQ9 333 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 PEX5LQ8IYB4 626 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 CLIP4Q8N3C7 705 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 ZNF610Q8N9Z0 462 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 TMEM234Q8WY98 164 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 CPNE4Q96A23 557 aaPredicted RBP12.17□□□□□ -0.46
SNX3-204ENST00000426155 GPATCH1Q9BRR8 931 aaKnown RBP12.17□□□□□ -0.46
SNX3-204ENST00000426155 OR11A1Q9GZK7 315 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 FAM107BQ9H098 131 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 RABEP2Q9H5N1 569 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 C12orf49Q9H741 205 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 PAQR5Q9NXK6 330 aaPredicted RBP12.17□□□□□ -0.46
SNX3-204ENST00000426155 LEF1Q9UJU2 399 aaPredicted RBP12.17□□□□□ -0.46
SNX3-204ENST00000426155 FOXD3Q9UJU5 478 aaPredicted RBP12.17□□□□□ -0.46
SNX3-204ENST00000426155 TRIM33Q9UPN9 1127 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 MYO9AB2RTY4 2548 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 OTOGQ6ZRI0 2925 aa12.17□□□□□ -0.46
SNX3-204ENST00000426155 TUBAL3A6NHL2 446 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 SMAD9O15198 467 aaKnown RBP12.16□□□□□ -0.46
SNX3-204ENST00000426155 ARAFP10398 606 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 AGTR1P30556 359 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 ARFIP2P53365 341 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 MTPNP58546 118 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 IRX1P78414 480 aaPredicted RBP12.16□□□□□ -0.46
SNX3-204ENST00000426155 SORDQ00796 357 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 EPS8Q12929 822 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 CAPRIN1Q14444 709 aaKnown RBP12.16□□□□□ -0.46
SNX3-204ENST00000426155 EXOC3L2Q2M3D2 409 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 SYT14P1Q58G82 188 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 GCNT6Q5T4J0 391 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 FCRLAQ7L513 359 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 GRINAQ7Z429 371 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 COMTD1Q86VU5 262 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 ADGRG3Q86Y34 549 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 CMIPQ8IY22 773 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 GMPPAQ96IJ6 420 aaPredicted RBP12.16□□□□□ -0.46
SNX3-204ENST00000426155 ARL5BQ96KC2 179 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 RAD21L1Q9H4I0 556 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 TMEM45AQ9NWC5 275 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 CALML5Q9NZT1 146 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 CHRNA9Q9UGM1 479 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 ADAM21Q9UKJ8 722 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 PROCRQ9UNN8 238 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 NDUFAF1Q9Y375 327 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 EMC9Q9Y3B6 208 aa12.16□□□□□ -0.46
SNX3-204ENST00000426155 CREBBPQ92793 2442 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 A0A0G2JPF8 293 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 TMEM72A0PK05 275 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 TMEM247A6NEH6 219 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 CFAP73A6NFT4 308 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 HNRNPCL2B2RXH8 293 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 HNRNPCL3B7ZW38 293 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 C5orf58C9J3I9 102 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 FBP2O00757 339 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 ANGPT2O15123 496 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 HNRNPCL1O60812 293 aaKnown RBP12.15□□□□□ -0.46
SNX3-204ENST00000426155 PGM3O95394 542 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 FESP07332 822 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 PABPC4LP0CB38 370 aaKnown RBP12.15□□□□□ -0.46
SNX3-204ENST00000426155 HNRNPCL4P0DMR1 293 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 TFPIP10646 304 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 CD8BP10966 210 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 TACR3P29371 465 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 AQP1P29972 269 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 KCNJ5P48544 419 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 DIO1P49895 249 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 CTBP2P56545 445 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 HOXC5Q00444 222 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 GNA13Q14344 377 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 RUNDC3AQ59EK9 446 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 RNF220Q5VTB9 566 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 NUFIP2Q7Z417 695 aaKnown RBP12.15□□□□□ -0.46
SNX3-204ENST00000426155 SERPINA11Q86U17 422 aa12.15□□□□□ -0.46
SNX3-204ENST00000426155 KIF18BQ86Y91 864 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms