RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SLC6A15Q9H2J7 730 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 PDP1Q9P0J1 537 aaPredicted RBP12.18□□□□□ -0.46
PRPF39-202ENST00000424478 DKKL1Q9UK85 242 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 A0A087WUU8 490 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 TRAPPC13A5PLN9 417 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 EIF4E2O60573 245 aaKnown RBP12.18□□□□□ -0.46
PRPF39-202ENST00000424478 DEAF1O75398 565 aaPredicted RBP12.18□□□□□ -0.46
PRPF39-202ENST00000424478 LCN1P31025 176 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 SFTPDP35247 375 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 GPR4P46093 362 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF41P51814 821 aaPredicted RBP12.18□□□□□ -0.46
PRPF39-202ENST00000424478 PSPHP78330 225 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 SLC34A1Q06495 639 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 DBPQ10586 325 aaPredicted RBP12.18□□□□□ -0.46
PRPF39-202ENST00000424478 PLPPR5Q32ZL2 321 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 TMEM251Q8N6I4 163 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 FADS6Q8N9I5 356 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 FRMD6Q96NE9 622 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 GPA33Q99795 319 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 FAM173AQ9BQD7 235 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF559Q9BR84 538 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 ZFP64Q9NPA5 681 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 IL20RAQ9UHF4 553 aa12.18□□□□□ -0.46
PRPF39-202ENST00000424478 ANKUB1A6NFN9 424 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 ZIC3O60481 467 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 MITFO75030 526 aaPredicted RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 IGFBP1P08833 259 aaPredicted RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 ITGA2P17301 1181 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 HK1P19367 917 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 PGCP20142 388 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 HSF1Q00613 529 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 SNTA1Q13424 505 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 C3AR1Q16581 482 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 PRR30Q53SZ7 412 aaPredicted RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 CYP4Z1Q86W10 505 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 NRMQ8IXM6 262 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 UBQLNLQ8IYU4 475 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 CBR4Q8N4T8 237 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 OR14L1PQ8NHC6 308 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 EME1Q96AY2 570 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 CENPNQ96H22 339 aaPredicted RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 SECISBP2Q96T21 854 aaKnown RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 COQ10BQ9H8M1 238 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 SDHAF3Q9NRP4 125 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 STOML1Q9UBI4 398 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 SEC14L4Q9UDX3 406 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 SNX4O95219 450 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 GP1BBP13224 206 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 RPP38P78345 283 aaKnown RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 LRRC17Q8N6Y2 441 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 FAM83FQ8NEG4 500 aaPredicted RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 FAM46AQ96IP4 442 aaKnown RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 MEPEQ9NQ76 525 aaPredicted RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 EXOSC3Q9NQT5 275 aaKnown RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 ACAD8Q9UKU7 415 aa12.17□□□□□ -0.46
PRPF39-202ENST00000424478 PCDHGA9Q9Y5G4 932 aaKnown RBP12.17□□□□□ -0.46
PRPF39-202ENST00000424478 EI24O14681 340 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 OR10H3O60404 316 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 SLC1A3P43003 542 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 GSSP48637 474 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 PTDSS1P48651 473 aaKnown RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 PPIAP62937 165 aaKnown RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 WBP2NLQ6ICG8 309 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF730Q6ZMV8 503 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 PRICKLE2Q7Z3G6 844 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 OFCC1Q8IZS5 231 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 OR4C15Q8NGM1 316 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 SCMH1Q96GD3 660 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ARL5BQ96KC2 179 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 NIPSNAP1Q9BPW8 284 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 LHX6Q9UPM6 363 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 KLF13Q9Y2Y9 288 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 IGKV1D-42A0A075B6H8 117 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 A0A1W2PNR3 127 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ANKRD33BA6NCL7 494 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 G3V2T6 193 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 KLK2P20151 261 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 SLC6A19Q695T7 634 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ADGRG3Q86Y34 549 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 DND1Q8IYX4 353 aaKnown RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 PIK3C3Q8NEB9 887 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 OR4K5Q8NGD3 323 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 MAGEE2Q8TD90 523 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 KTI12Q96EK9 354 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 TMEM41AQ96HV5 264 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 TRIM2Q9C040 744 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF703Q9H7S9 590 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 PTGES2Q9H7Z7 377 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 YY1AP1Q9H869 796 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 C15orf41Q9Y2V0 281 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 TMEM72A0PK05 275 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ELOA3DA6NLF2 546 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 RPS5P46782 204 aaKnown RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 EGR4Q05215 589 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ST3GAL3Q11203 375 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 RIPK1Q13546 671 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ZNF169Q14929 603 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ST3GAL2Q16842 350 aa12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ZIK1Q3SY52 487 aaPredicted RBP12.16□□□□□ -0.46
PRPF39-202ENST00000424478 ELOA3BQ3SY89 546 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms