RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RAI1Q7Z5J4 1906 aaPredicted RBP13.53□□□□□ -0.24
USB1-202ENST00000423271 IGHV3-15A0A0B4J1V0 119 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 PRAMEF27A3QJZ7 478 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 GJE1A6NN92 205 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 CSTAP01040 98 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 UBTFL6P0CB48 400 aaPredicted RBP13.53□□□□□ -0.24
USB1-202ENST00000423271 DRD4P21917 467 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 ENPP1P22413 925 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 CHI3L1P36222 383 aaPredicted RBP13.53□□□□□ -0.24
USB1-202ENST00000423271 KHKP50053 298 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 SLC2A7Q6PXP3 512 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 FRRS1Q6ZNA5 592 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 ZNF621Q6ZSS3 439 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 FCRLAQ7L513 359 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 NUFIP2Q7Z417 695 aaKnown RBP13.53□□□□□ -0.24
USB1-202ENST00000423271 CXorf67Q86X51 503 aaPredicted RBP13.53□□□□□ -0.24
USB1-202ENST00000423271 TUSC5Q8IXB3 177 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 ROPN1LQ96C74 230 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 SPDL1Q96EA4 605 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 NEURL3Q96EH8 262 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 ITCHQ96J02 903 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 ELAC2Q9BQ52 826 aaKnown RBP13.53□□□□□ -0.24
USB1-202ENST00000423271 SLC35A5Q9BS91 424 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 FAM107BQ9H098 131 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 RABEP2Q9H5N1 569 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 RMND5AQ9H871 391 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 UBTD1Q9HAC8 227 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 SLC52A3Q9NQ40 469 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 TIGARQ9NQ88 270 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 TMEM45AQ9NWC5 275 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 WDR45Q9Y484 360 aa13.53□□□□□ -0.24
USB1-202ENST00000423271 GMNCA6NCL1 334 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 DNAJA2O60884 412 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 SLC7A1P30825 629 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 PGM1P36871 562 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 SESN3P58005 492 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 PLAURQ03405 335 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 GTDC1Q4AE62 458 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 ATAD3BQ5T9A4 648 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 GTF2IRD2BQ6EKJ0 949 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 TFAP2EQ6VUC0 442 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 BEND4Q6ZU67 534 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 EIF3MQ7L2H7 374 aaKnown RBP13.52□□□□□ -0.25
USB1-202ENST00000423271 SPATA21Q7Z572 469 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 GTF2IRD2Q86UP8 949 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 RNF130Q86XS8 419 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 ZNF619Q8N2I2 560 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 FAM71CQ8NEG0 241 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 GTF2H4Q92759 462 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 ZG16BQ96DA0 208 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 REXO5Q96IC2 774 aaKnown RBP13.52□□□□□ -0.25
USB1-202ENST00000423271 ACTR6Q9GZN1 396 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 DLL4Q9NR61 685 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 BEX4Q9NWD9 120 aaPredicted RBP13.52□□□□□ -0.25
USB1-202ENST00000423271 KLHL13Q9P2N7 655 aa13.52□□□□□ -0.25
USB1-202ENST00000423271 DSCAMO60469 2012 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.51□□□□□ -0.25
USB1-202ENST00000423271 CLDN24A6NM45 220 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 HMGN4O00479 90 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 KLF4O43474 513 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 ANP32DO95626 131 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 AGR2O95994 175 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 PABPC4LP0CB38 370 aaKnown RBP13.51□□□□□ -0.25
USB1-202ENST00000423271 HOXC12P31275 282 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 CHRNEQ04844 493 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 RNPS1Q15287 305 aaKnown RBP13.51□□□□□ -0.25
USB1-202ENST00000423271 TSC22D1Q15714 1073 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 PAGE3Q5JUK9 113 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 TMEM201Q5SNT2 666 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 C6orf10Q5SRN2 563 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 C3orf33Q6P1S2 294 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 PLEKHM3Q6ZWE6 761 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 STK32CQ86UX6 486 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 TRIML2Q8N7C3 387 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 ANKFN1Q8N957 763 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 PNPT1Q8TCS8 783 aaKnown RBP13.51□□□□□ -0.25
USB1-202ENST00000423271 ST8SIA1Q92185 356 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 OR5B2Q96R09 309 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 PAIP1Q9H074 479 aaKnown RBP13.51□□□□□ -0.25
USB1-202ENST00000423271 SAP130Q9H0E3 1048 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 SAR1AQ9NR31 198 aa13.51□□□□□ -0.25
USB1-202ENST00000423271 ING1Q9UK53 422 aaPredicted RBP13.51□□□□□ -0.25
USB1-202ENST00000423271 SMAD9O15198 467 aaKnown RBP13.5□□□□□ -0.25
USB1-202ENST00000423271 ADAM11O75078 769 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 GCM2O75603 506 aaPredicted RBP13.5□□□□□ -0.25
USB1-202ENST00000423271 PRKD3O94806 890 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 GUSBP08236 651 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 ZCCHC18P0CG32 403 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 PPP3CBP16298 524 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 PGCP20142 388 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 PSMB1P20618 241 aaKnown RBP13.5□□□□□ -0.25
USB1-202ENST00000423271 RAC3P60763 192 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 MERTKQ12866 999 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 SYPL1Q16563 259 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 ACKR1Q16570 336 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 GPAT3Q53EU6 434 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 BEX5Q5H9J7 111 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 WFDC8Q8IUA0 241 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 GABRG1Q8N1C3 465 aa13.5□□□□□ -0.25
USB1-202ENST00000423271 AURKBQ96GD4 344 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms