RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ABTB1Q969K4 478 aaPredicted RBP15.34■□□□□ 0.05
COL7A1-202ENST00000422991 C3orf49Q96BT1 292 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 SARAFQ96BY9 339 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 PYURFQ96I23 114 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 LRGUKQ96M69 825 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 AMBRA1Q9C0C7 1298 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 CTPS2Q9NRF8 586 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 TNFRSF10DQ9UBN6 386 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 RPS6KB2Q9UBS0 482 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 OSGIN1Q9UJX0 560 aa15.34■□□□□ 0.05
COL7A1-202ENST00000422991 A0A0B4J2E0 115 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 A0A1B0GX12 115 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 AQP12BA6NM10 295 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 CPSF4LA6NMK7 179 aaKnown RBP15.33■□□□□ 0.04
COL7A1-202ENST00000422991 H3BML4 177 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 SEMA7AO75326 666 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 POU3F2P20265 443 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-202ENST00000422991 TACR3P29371 465 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 PTGS2P35354 604 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 APOBEC1P41238 236 aaKnown RBP15.33■□□□□ 0.04
COL7A1-202ENST00000422991 CLDN18P56856 261 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 GTF3C1Q12789 2109 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 SELENBP1Q13228 472 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 ENTPD8Q5MY95 495 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 ZNF613Q6PF04 617 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 ATG4DQ86TL0 474 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-202ENST00000422991 AQP12AQ8IXF9 295 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 POP5Q969H6 163 aaKnown RBP15.33■□□□□ 0.04
COL7A1-202ENST00000422991 C7orf34Q96L11 122 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 TIMP4Q99727 224 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 POLR2J2Q9GZM3 115 aaKnown RBP15.33■□□□□ 0.04
COL7A1-202ENST00000422991 POLR2J3Q9H1A7 115 aaKnown RBP15.33■□□□□ 0.04
COL7A1-202ENST00000422991 TMEM27Q9HBJ8 222 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 AP4B1Q9Y6B7 739 aa15.33■□□□□ 0.04
COL7A1-202ENST00000422991 TMED7-TICAM2A0A0A6YYA0 188 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 NPIPA2E9PIF3 369 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 NPIPA3F8WFD2 350 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 PEPDP12955 493 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 ZNF708P17019 499 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 STARP49675 285 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 RAC1P63000 192 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 BCL2A1Q16548 175 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 SWT1Q5T5J6 900 aaKnown RBP15.32■□□□□ 0.04
COL7A1-202ENST00000422991 C1orf146Q5VVC0 180 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 C3orf33Q6P1S2 294 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 ULK3Q6PHR2 472 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 POMZP3Q6PJE2 187 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 TSEN54Q7Z6J9 526 aaKnown RBP15.32■□□□□ 0.04
COL7A1-202ENST00000422991 ADGRG3Q86Y34 549 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 GALNT11Q8NCW6 608 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 ADAMTS16Q8TE57 1224 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 DNAJA4Q8WW22 397 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-202ENST00000422991 SLC47A1Q96FL8 570 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 PRDM14Q9GZV8 571 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 TMEM185BQ9H7F4 350 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 C12orf10Q9HB07 376 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 CHRNA9Q9UGM1 479 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 ZNF835Q9Y2P0 537 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 TMED7Q9Y3B3 224 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 ENPP4Q9Y6X5 453 aa15.32■□□□□ 0.04
COL7A1-202ENST00000422991 POLEQ07864 2286 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 TRAPPC13A5PLN9 417 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 BCKDKO14874 412 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 SLC19A2O60779 497 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 CIB2O75838 187 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 LYPD3O95274 346 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 THY1P04216 161 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 CPN1P15169 458 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 ABOP16442 354 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 SHC1P29353 583 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 CLDN20P56880 219 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 VLDLRP98155 873 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 RBPJQ06330 500 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 IGFBP7Q16270 282 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 C3AR1Q16581 482 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.31■□□□□ 0.04
COL7A1-202ENST00000422991 ALG10BQ5I7T1 473 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 Q6ZPB1 254 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-202ENST00000422991 GGNQ86UU5 652 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 LSRQ86X29 649 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-202ENST00000422991 LILRA2Q8N149 483 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 FAM57AQ8TBR7 257 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 SLC25A43Q8WUT9 341 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-202ENST00000422991 SMPDL3BQ92485 455 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 WDYHV1Q96HA8 205 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 PRRC1Q96M27 445 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 MAGIXQ9H6Y5 334 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 SERINC1Q9NRX5 453 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 ACAD8Q9UKU7 415 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 A4GNTQ9UNA3 340 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 SPIN1Q9Y657 262 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-202ENST00000422991 MPDZO75970 2070 aa15.31■□□□□ 0.04
COL7A1-202ENST00000422991 FLNCQ14315 2725 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 TCRBV3S1A0A5B6 114 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 TMEM72A0PK05 275 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 hCG_2039718K7EN88 272 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 CHP2O43745 196 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 OR5F1O95221 314 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 PNMTP11086 282 aa15.3■□□□□ 0.04
COL7A1-202ENST00000422991 CXCR1P25024 350 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms