RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 SERPINA11Q86U17 422 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 SPATA24Q86W54 205 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 CNEP1R1Q8N9A8 125 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 C9orf106Q8NAJ2 232 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 NAXEQ8NCW5 288 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 OR5W2Q8NH69 310 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 LILRB4Q8NHJ6 448 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 BBS10Q8TAM1 723 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 ZPLD1Q8TCW7 415 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 MARVELD3Q96A59 401 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 ASB9Q96DX5 294 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 LRRC46Q96FV0 321 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 NSMCE2Q96MF7 247 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 ZNF583Q96ND8 569 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 NPAS1Q99742 590 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 TM9SF2Q99805 663 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 LAT2Q9GZY6 243 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 SLC38A1Q9H2H9 487 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 MUC13Q9H3R2 512 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 RUBCNLQ9H714 662 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 CALHM2Q9HA72 323 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 A4GALTQ9NPC4 353 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 CD300AQ9UGN4 299 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 KCNE5Q9UJ90 142 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 POMPQ9Y244 141 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 SLC35A3Q9Y2D2 325 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 AP4B1Q9Y6B7 739 aa8.72□□□□□ -1.01
HERC3-204ENST00000422770 USP9XQ93008 2570 aaPredicted RBP8.72□□□□□ -1.01
HERC3-204ENST00000422770 SPTAN1Q13813 2472 aaKnown RBP8.72□□□□□ -1.01
HERC3-204ENST00000422770 SPTBN1Q01082 2364 aaKnown RBP8.71□□□□□ -1.01
HERC3-204ENST00000422770 INTS1Q8N201 2190 aaKnown RBP8.71□□□□□ -1.01
HERC3-204ENST00000422770 C19orf84I3L1E1 186 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 HNRNPRO43390 633 aaKnown RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 CXCL13O43927 109 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 SMNDC1O75940 238 aaKnown RBP eCLIP8.71□□□□□ -1.02
HERC3-204ENST00000422770 TOXO94900 526 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 ZNF682O95780 498 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 PLGP00747 810 aaPredicted RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 OPN1SWP03999 348 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 DBIP07108 87 aaKnown RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 LINGO3P0C6S8 592 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 TFPIP10646 304 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 BMP2P12643 396 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 GGT1P19440 569 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 CCNA2P20248 432 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 SLC7A1P30825 629 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 TIMP3P35625 211 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 MAGEA8P43361 318 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 GZMMP51124 257 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 SIRPAP78324 504 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 DMTNQ08495 405 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 RBBP4Q09028 425 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 MERTKQ12866 999 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 LARS2Q15031 903 aaKnown RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 BCL2A1Q16548 175 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 SLC25A35Q3KQZ1 300 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 SPATS1Q496A3 300 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 MRPL2Q5T653 305 aaKnown RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 INTS11Q5TA45 600 aaKnown RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 HBMQ6B0K9 141 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 LCN8Q6JVE9 175 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 MEX3BQ6ZN04 569 aaKnown RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 SEM1Q6ZVN7 128 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 DHFR2Q86XF0 187 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 VRK2Q86Y07 508 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 MCEMP1Q8IX19 187 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 LILRA2Q8N149 483 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 GTPBP8Q8N3Z3 284 aaPredicted RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 OR52P1PQ8NH57 321 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 GPR119Q8TDV5 335 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 SLC38A5Q8WUX1 472 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 TMEM234Q8WY98 164 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 ZG16BQ96DA0 208 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 ZNF845Q96IR2 970 aaPredicted RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 TMEM38AQ9H6F2 299 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 MTHFD2LQ9H903 347 aaPredicted RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 THUMPD1Q9NXG2 353 aaKnown RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 CLCF1Q9UBD9 225 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 ICAM5Q9UMF0 924 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 GPC6Q9Y625 555 aaPredicted RBP8.71□□□□□ -1.02
HERC3-204ENST00000422770 GMEB1Q9Y692 573 aa8.71□□□□□ -1.02
HERC3-204ENST00000422770 MBD3L4A6NDZ8 208 aaPredicted RBP8.7□□□□□ -1.02
HERC3-204ENST00000422770 MBD3L3A6NE82 208 aaPredicted RBP8.7□□□□□ -1.02
HERC3-204ENST00000422770 AGAP5A6NIR3 686 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 MBD3L5A6NJ08 208 aaPredicted RBP8.7□□□□□ -1.02
HERC3-204ENST00000422770 GJE1A6NN92 205 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 BCAS1O75363 584 aaPredicted RBP8.7□□□□□ -1.02
HERC3-204ENST00000422770 TGM6O95932 706 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 SERPINA1P01009 418 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 FCGR2AP12318 317 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 UQCRBP14927 111 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 PRKCAP17252 672 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 IL11P20809 199 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 CTSSP25774 331 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 ELK4P28324 431 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 CEACAM8P31997 349 aaPredicted RBP8.7□□□□□ -1.02
HERC3-204ENST00000422770 OPRM1P35372 400 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 ZNF136P52737 540 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 SESN3P58005 492 aa8.7□□□□□ -1.02
HERC3-204ENST00000422770 RAC1P63000 192 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms