RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 LIPT1Q9Y234 373 aa22.68■■□□□ 1.22
SMDT1-202ENST00000422252 SMAD9O15198 467 aaKnown RBP22.67■■□□□ 1.22
SMDT1-202ENST00000422252 CYTIPO60759 359 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 RYKP34925 604 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 APOBEC1P41238 236 aaKnown RBP22.67■■□□□ 1.22
SMDT1-202ENST00000422252 DIO1P49895 249 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 NR1H2P55055 460 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 RASGEF1BQ0VAM2 473 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 SYPL1Q16563 259 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 SYT14P1Q58G82 188 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 NXNQ6DKJ4 435 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 TMPPEQ6ZT21 453 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 S100PBPQ96BU1 408 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 TLCD1Q96CP7 247 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 CCDC106Q9BWC9 280 aa22.67■■□□□ 1.22
SMDT1-202ENST00000422252 SPIN1Q9Y657 262 aaPredicted RBP22.67■■□□□ 1.22
SMDT1-202ENST00000422252 ARHGEF9O43307 516 aa22.66■■□□□ 1.22
SMDT1-202ENST00000422252 GSNP06396 782 aa22.66■■□□□ 1.22
SMDT1-202ENST00000422252 IDO1P14902 403 aa22.66■■□□□ 1.22
SMDT1-202ENST00000422252 CSNK2A1P68400 391 aaPredicted RBP22.66■■□□□ 1.22
SMDT1-202ENST00000422252 PDCD4Q53EL6 469 aaKnown RBP22.66■■□□□ 1.22
SMDT1-202ENST00000422252 BEND6Q5SZJ8 279 aaPredicted RBP22.66■■□□□ 1.22
SMDT1-202ENST00000422252 SFRP5Q5T4F7 317 aa22.66■■□□□ 1.22
SMDT1-202ENST00000422252 P3H2Q8IVL5 708 aa22.66■■□□□ 1.22
SMDT1-202ENST00000422252 ARFGAP2Q8N6H7 521 aa22.66■■□□□ 1.22
SMDT1-202ENST00000422252 ANKFN1Q8N957 763 aa22.66■■□□□ 1.22
SMDT1-202ENST00000422252 PLPPR2Q96GM1 343 aa22.66■■□□□ 1.22
SMDT1-202ENST00000422252 MAELQ96JY0 434 aaKnown RBP22.66■■□□□ 1.22
SMDT1-202ENST00000422252 CTPS2Q9NRF8 586 aa22.66■■□□□ 1.22
SMDT1-202ENST00000422252 ACANP16112 2415 aa22.66■■□□□ 1.22
SMDT1-202ENST00000422252 NF1P21359 2839 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 CLDN24A6NM45 220 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 SULT2B1O00204 365 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 ADAP00813 363 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 IL6P05231 212 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 IL32P24001 234 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 PLAURQ03405 335 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 SLC9B1Q4ZJI4 515 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 ZNF704Q6ZNC4 412 aaPredicted RBP22.65■■□□□ 1.22
SMDT1-202ENST00000422252 LRRC74BQ6ZQY2 392 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 GRINAQ7Z429 371 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 SLC38A1Q9H2H9 487 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 GSX1Q9H4S2 264 aaPredicted RBP22.65■■□□□ 1.22
SMDT1-202ENST00000422252 CHRNA9Q9UGM1 479 aa22.65■■□□□ 1.22
SMDT1-202ENST00000422252 RFXANKO14593 260 aa22.64■■□□□ 1.21
SMDT1-202ENST00000422252 SLC22A3O75751 556 aa22.64■■□□□ 1.21
SMDT1-202ENST00000422252 FESP07332 822 aa22.64■■□□□ 1.21
SMDT1-202ENST00000422252 CHRM4P08173 479 aa22.64■■□□□ 1.21
SMDT1-202ENST00000422252 OR3A2P47893 321 aa22.64■■□□□ 1.21
SMDT1-202ENST00000422252 P2RY6Q15077 328 aa22.64■■□□□ 1.21
SMDT1-202ENST00000422252 TSC22D1Q15714 1073 aa22.64■■□□□ 1.21
SMDT1-202ENST00000422252 Q5PR19 223 aa22.64■■□□□ 1.21
SMDT1-202ENST00000422252 COX20Q5RI15 118 aa22.64■■□□□ 1.21
SMDT1-202ENST00000422252 CMIPQ8IY22 773 aa22.64■■□□□ 1.21
SMDT1-202ENST00000422252 PNPT1Q8TCS8 783 aaKnown RBP22.64■■□□□ 1.21
SMDT1-202ENST00000422252 CNOT9Q92600 299 aaKnown RBP22.64■■□□□ 1.21
SMDT1-202ENST00000422252 KISS1RQ969F8 398 aaPredicted RBP22.64■■□□□ 1.21
SMDT1-202ENST00000422252 ZNF300Q96RE9 604 aaPredicted RBP22.64■■□□□ 1.21
SMDT1-202ENST00000422252 RAI1Q7Z5J4 1906 aaPredicted RBP22.64■■□□□ 1.21
SMDT1-202ENST00000422252 FLNAP21333 2647 aaKnown RBP22.63■■□□□ 1.21
SMDT1-202ENST00000422252 AGAP5A6NIR3 686 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 ZNF724A8MTY0 619 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 ZNF814B7Z6K7 855 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 ADAM11O75078 769 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 KRT75O95678 551 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 TFPIP10646 304 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 ITGADQ13349 1161 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 GSTA3Q16772 222 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 ALKBH2Q6NS38 261 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 Q6ZT83 130 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 MAVSQ7Z434 540 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 PIWIL2Q8TC59 973 aaKnown RBP22.63■■□□□ 1.21
SMDT1-202ENST00000422252 ZNF775Q96BV0 537 aaPredicted RBP22.63■■□□□ 1.21
SMDT1-202ENST00000422252 TMEM204Q9BSN7 226 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 MTHFD2LQ9H903 347 aaPredicted RBP22.63■■□□□ 1.21
SMDT1-202ENST00000422252 ZIM2Q9NZV7 527 aa22.63■■□□□ 1.21
SMDT1-202ENST00000422252 KLF11O14901 512 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 PLAUP00749 431 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 NR2F1P10589 423 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 FKBP2P26885 142 aaKnown RBP22.62■■□□□ 1.21
SMDT1-202ENST00000422252 IDH2P48735 452 aaKnown RBP22.62■■□□□ 1.21
SMDT1-202ENST00000422252 ABLIM2Q6H8Q1 611 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 GALNT5Q7Z7M9 940 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 MTDHQ86UE4 582 aaKnown RBP22.62■■□□□ 1.21
SMDT1-202ENST00000422252 ADGRG3Q86Y34 549 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 WDR60Q8WVS4 1066 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 HSD17B8Q92506 261 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 ZNF75CPQ92670 426 aaPredicted RBP22.62■■□□□ 1.21
SMDT1-202ENST00000422252 PMM1Q92871 262 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 C18orf12Q96KH6 178 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 HDGFL3Q9Y3E1 203 aa22.62■■□□□ 1.21
SMDT1-202ENST00000422252 PMS2P2O95744 297 aa22.61■■□□□ 1.21
SMDT1-202ENST00000422252 RPS4Y1P22090 263 aaKnown RBP22.61■■□□□ 1.21
SMDT1-202ENST00000422252 MAGEA8P43361 318 aa22.61■■□□□ 1.21
SMDT1-202ENST00000422252 HTR3AP46098 478 aa22.61■■□□□ 1.21
SMDT1-202ENST00000422252 CLK1P49759 484 aaKnown RBP22.61■■□□□ 1.21
SMDT1-202ENST00000422252 GNA13Q14344 377 aa22.61■■□□□ 1.21
SMDT1-202ENST00000422252 TAB1Q15750 504 aa22.61■■□□□ 1.21
SMDT1-202ENST00000422252 FREM1Q5H8C1 2179 aa22.61■■□□□ 1.21
SMDT1-202ENST00000422252 DNAJC14Q6Y2X3 702 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms