RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 TBX19O60806 448 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 NID1P14543 1247 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 HIST1H1CP16403 213 aaKnown RBP12.32□□□□□ -0.44
MCF2L-213ENST00000421756 DRD5P21918 477 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 NDUFS1P28331 727 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 STAT5AP42229 794 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 ZNHIT3Q15649 155 aaPredicted RBP12.32□□□□□ -0.44
MCF2L-213ENST00000421756 TMEM151BQ8IW70 566 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 OR4D9Q8NGE8 314 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 ZNRF4Q8WWF5 429 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 SLC25A36Q96CQ1 311 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 SLC38A3Q99624 504 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 SLC22A4Q9H015 551 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 TMA7Q9Y2S6 64 aaKnown RBP12.32□□□□□ -0.44
MCF2L-213ENST00000421756 ACOD1A6NK06 481 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 PLA2G10O15496 165 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 SELENOFO60613 162 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 GABRA5P31644 462 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 DECR1Q16698 335 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 TATDN3Q17R31 274 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 ZNF628Q5EBL2 1059 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 LCN1P1Q5VSP4 162 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 KIRREL2Q6UWL6 708 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 TMEM91Q6ZNR0 172 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 MCATQ8IVS2 390 aaKnown RBP12.32□□□□□ -0.44
MCF2L-213ENST00000421756 CHAC2Q8WUX2 184 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 GHSRQ92847 366 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 HOXD1Q9GZZ0 328 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 PCDH15Q96QU1 1955 aa12.32□□□□□ -0.44
MCF2L-213ENST00000421756 GPR89AB7ZAQ6 455 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 MCIDASD6RGH6 385 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 TGFBR3LH3BV60 316 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 OPN1LWP04000 364 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 GPR89BP0CG08 455 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 AHCYP23526 432 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 SQSTM1Q13501 440 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 ARHGAP11BQ3KRB8 267 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 C16orf47Q6ZP98 133 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 QSOX2Q6ZRP7 698 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 CA13Q8N1Q1 262 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 CDRT4Q8N9R6 151 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 FRMD6Q96NE9 622 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 RNF32Q9H0A6 362 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 BRD7Q9NPI1 651 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 BABAM2Q9NXR7 383 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 C19orf53Q9UNZ5 99 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 RNF13O43567 381 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 IL1AP01583 271 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 HMGN1P05114 100 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 DBIP07108 87 aaKnown RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 FBXO45P0C2W1 286 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 IL9P15248 144 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 UBXN2BQ14CS0 331 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 HES5Q5TA89 166 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 ZNF544Q6NX49 715 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 MEPCEQ7L2J0 689 aaKnown RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 CEP76Q8TAP6 659 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 MOAP1Q96BY2 351 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 MRPL38Q96DV4 380 aaKnown RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 MESP1Q9BRJ9 268 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 NDEL1Q9GZM8 345 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 ENAMQ9NRM1 1142 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 DZANK1Q9NVP4 752 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 SLC6A5Q9Y345 797 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 SF3B6Q9Y3B4 125 aaKnown RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 GALR3O60755 368 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 CBX7O95931 251 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 EEF1A1P68104 462 aaKnown RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 PSG6Q00889 435 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 PRICKLE4Q2TBC4 344 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 C19orf48Q6RUI8 117 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 METAP1DQ6UB28 335 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 CBLN3Q6UW01 205 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 KDM8Q8N371 416 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 BAHD1Q8TBE0 780 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 AP3S1Q92572 193 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 TXNDC15Q96J42 360 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 CITED4Q96RK1 184 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 PITHD1Q9GZP4 211 aaPredicted RBP12.31□□□□□ -0.44
MCF2L-213ENST00000421756 CDCP1Q9H5V8 836 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 FKRPQ9H9S5 495 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 ASB6Q9NWX5 421 aa12.31□□□□□ -0.44
MCF2L-213ENST00000421756 A0A075B6Q4 140 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 B4DXG7 233 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 SYT5O00445 386 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 HTR1FP30939 366 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 TALDO1P37837 337 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 TNFRSF4P43489 277 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.3□□□□□ -0.44
MCF2L-213ENST00000421756 NIPAL3Q6P499 406 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 UBQLNLQ8IYU4 475 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 RDH10Q8IZV5 341 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 OR4M1Q8NGD0 313 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 OR5H6Q8NGV6 325 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 OR14A2Q96R54 314 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 ADOQ96SZ5 270 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 COQ7Q99807 217 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 NDC1Q9BTX1 674 aa12.3□□□□□ -0.44
MCF2L-213ENST00000421756 SPRTNQ9H040 489 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-213ENST00000421756 KRCC1Q9NPI7 259 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms