RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 GDPGP1Q6ZNW5 385 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 BCORP1Q8N888 145 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 OR5M3Q8NGP4 307 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 OR6K6Q8NGW6 343 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 ABHD8Q96I13 439 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 VSTM2LQ96N03 204 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 DEPDC7Q96QD5 511 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 ADOQ96SZ5 270 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 TEAD3Q99594 435 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.08□□□□□ -0.8
DDX56-203ENST00000421223 DNAJB12Q9NXW2 375 aaKnown RBP10.08□□□□□ -0.8
DDX56-203ENST00000421223 GRIP1Q9Y3R0 1128 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 HEATR5AQ86XA9 2040 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 E9PI62 339 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 GABRPO00591 440 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 HCN1O60741 890 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 PRAMEF2O60811 474 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 AK1P00568 194 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 DCNP07585 359 aaKnown RBP10.08□□□□□ -0.8
DDX56-203ENST00000421223 CT45A8P0DMV1 189 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 CT45A9P0DMV2 189 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 TBXA2RP21731 343 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 ITPKBP27987 946 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 PYCR1P32322 319 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 ACAA2P42765 397 aaKnown RBP10.08□□□□□ -0.8
DDX56-203ENST00000421223 NKX2-5P52952 324 aaPredicted RBP10.08□□□□□ -0.8
DDX56-203ENST00000421223 CT45A2Q5DJT8 189 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 NIPAL3Q6P499 406 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 ZNF322Q6U7Q0 402 aaPredicted RBP10.08□□□□□ -0.8
DDX56-203ENST00000421223 MED25Q71SY5 747 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 NRARPQ7Z6K4 114 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 SLC25A46Q96AG3 418 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 NEDD4LQ96PU5 975 aa10.08□□□□□ -0.8
DDX56-203ENST00000421223 SIRT4Q9Y6E7 314 aaPredicted RBP10.08□□□□□ -0.8
DDX56-203ENST00000421223 A0A0B4J2E0 115 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 A0A1B0GX12 115 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 FAM25AB3EWG3 89 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 FAM25CB3EWG5 89 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 FAM25GB3EWG6 89 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 H3BSH0 61 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 BHLHE40O14503 412 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 GLULP15104 373 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 DRD5P21918 477 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 BCKDHBP21953 392 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 OR12D2P58182 307 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 HNRNPKP61978 463 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDX56-203ENST00000421223 TPBGQ13641 420 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 IDNKQ5T6J7 187 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 PRR23CQ6ZRP0 262 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 ZNF595Q8IYB9 648 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 DPYSL5Q9BPU6 564 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 TRIM2Q9C040 744 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 CHP2O43745 196 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 HPGDSO60760 199 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 HLA-DPB1P04440 258 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 ZNF3P17036 446 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 RPS4Y1P22090 263 aaKnown RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 GABRA5P31644 462 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 ETV6P41212 452 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 ATP12AP54707 1039 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 ERVK-25P63136 954 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 RACK1P63244 317 aaKnown RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 PSPHP78330 225 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 ZP2Q05996 745 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 TP53I3Q53FA7 332 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 DDI2Q5TDH0 399 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 CBLN3Q6UW01 205 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 LYPD4Q6UWN0 246 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 IL20RBQ6UXL0 311 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 RTL4Q6ZR62 310 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 TMEM151BQ8IW70 566 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 RNF113BQ8IZP6 322 aaKnown RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 TOR1AIP2Q8NFQ8 470 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 C4orf36Q96KX1 117 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 SDHCQ99643 169 aaPredicted RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 MKKSQ9NPJ1 570 aaPredicted RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 PLEKHB1Q9UF11 243 aaPredicted RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 RNF215Q9Y6U7 377 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 A0A1B0GVT2 93 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 A0A1W2PQ09 198 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 A0A1W2PRG6 482 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 SHISA3A0PJX4 238 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 C4orf47A7E2U8 309 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 A8MV72 311 aaPredicted RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 LYPD3O95274 346 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 NSA2O95478 260 aaKnown RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 IL9P15248 144 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 HIST1H1CP16403 213 aaKnown RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 HK1P19367 917 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 E2F1Q01094 437 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 SELENBP1Q13228 472 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 SMAD4Q13485 552 aaKnown RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.07□□□□□ -0.8
DDX56-203ENST00000421223 OTPQ5XKR4 325 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 ZNF613Q6PF04 617 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 TSSK4Q6SA08 328 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 MRGPREQ86SM8 312 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 GID4Q8IVV7 300 aa10.07□□□□□ -0.8
DDX56-203ENST00000421223 GPR135Q8IZ08 494 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms