RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 PGCP20142 388 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 RPS4Y1P22090 263 aaKnown RBP9.8□□□□□ -0.84
SSBP3-206ENST00000420121 KHKP50053 298 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 MAGOHP61326 146 aaKnown RBP9.8□□□□□ -0.84
SSBP3-206ENST00000420121 NKX6-1P78426 367 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-206ENST00000420121 SLC9B1Q4ZJI4 515 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 BEX5Q5H9J7 111 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 COX20Q5RI15 118 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 TMEM201Q5SNT2 666 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 ATAD3BQ5T9A4 648 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 GTF2IRD2BQ6EKJ0 949 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 EIF3MQ7L2H7 374 aaKnown RBP9.8□□□□□ -0.84
SSBP3-206ENST00000420121 GTF2IRD2Q86UP8 949 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 MGARPQ8TDB4 240 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 CNOT9Q92600 299 aaKnown RBP9.8□□□□□ -0.84
SSBP3-206ENST00000420121 S100PBPQ96BU1 408 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 OR5B2Q96R09 309 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 ZNF300Q96RE9 604 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-206ENST00000420121 UBTD1Q9HAC8 227 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 TMBIM4Q9HC24 238 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 TIGARQ9NQ88 270 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 SLC35A3Q9Y2D2 325 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 TLN2Q9Y4G6 2542 aa9.8□□□□□ -0.84
SSBP3-206ENST00000420121 AGAP5A6NIR3 686 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 ZNF716A6NP11 495 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 POM121CA8CG34 1229 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 AP3D1O14617 1153 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 GSNP06396 782 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 KITP10721 976 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 HOXB4P17483 251 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-206ENST00000420121 SLC7A1P30825 629 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 CHI3L1P36222 383 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-206ENST00000420121 OR3A2P47893 321 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 DIO1P49895 249 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 KCNJ10P78508 379 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 MERTKQ12866 999 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 PDCD4Q53EL6 469 aaKnown RBP9.79□□□□□ -0.84
SSBP3-206ENST00000420121 SYT14P1Q58G82 188 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 SFRP5Q5T4F7 317 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 ABLIM2Q6H8Q1 611 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 TMPPEQ6ZT21 453 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 ATG4DQ86TL0 474 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-206ENST00000420121 STK32CQ86UX6 486 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 ADGRG3Q86Y34 549 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 WFDC8Q8IUA0 241 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 LRRC75A-AS1Q8N1F1 130 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 SLC43A2Q8N370 569 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 LILRB1Q8NHL6 650 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-206ENST00000420121 RAB3IL1Q8TBN0 382 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 PLPPR2Q96GM1 343 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 REXO5Q96IC2 774 aaKnown RBP9.79□□□□□ -0.84
SSBP3-206ENST00000420121 ARL5BQ96KC2 179 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 TRNT1Q96Q11 434 aaKnown RBP9.79□□□□□ -0.84
SSBP3-206ENST00000420121 OR52B2Q96RD2 323 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 OR52E6Q96RD3 313 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 PANX1Q96RD7 426 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 SMR3AQ99954 134 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 MANSC1Q9H8J5 431 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 EXOSC3Q9NQT5 275 aaKnown RBP9.79□□□□□ -0.84
SSBP3-206ENST00000420121 CTPS2Q9NRF8 586 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 PRSS50Q9UI38 385 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 PLCE1Q9P212 2302 aa9.79□□□□□ -0.84
SSBP3-206ENST00000420121 FN1P02751 2386 aaKnown RBP9.79□□□□□ -0.84
SSBP3-206ENST00000420121 IGKV3D-15A0A087WSY6 115 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 TRPC5OSA6NMA1 111 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 ZNF724A8MTY0 619 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 RAMP1O60894 148 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 ADAP00813 363 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 FESP07332 822 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 HOXB9P17482 250 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-206ENST00000420121 FPR1P21462 350 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 NTF4P34130 210 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 RYKP34925 604 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 APOBEC1P41238 236 aaKnown RBP9.78□□□□□ -0.84
SSBP3-206ENST00000420121 RASGEF1BQ0VAM2 473 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 TAB1Q15750 504 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 GTDC1Q4AE62 458 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 GPAT3Q53EU6 434 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 Q5PR19 223 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 SHEQ5VZ18 495 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 ZNF704Q6ZNC4 412 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-206ENST00000420121 C20orf204Q6ZNR8 217 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 LRRC74BQ6ZQY2 392 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 ZNF621Q6ZSS3 439 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 Q6ZT83 130 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.78□□□□□ -0.84
SSBP3-206ENST00000420121 GRINAQ7Z429 371 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 GLB1L3Q8NCI6 653 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-206ENST00000420121 STEAP2Q8NFT2 490 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 OR9I1Q8NGQ6 314 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 PNPT1Q8TCS8 783 aaKnown RBP9.78□□□□□ -0.84
SSBP3-206ENST00000420121 TMEM234Q8WY98 164 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 PIGTQ969N2 578 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 ZNF775Q96BV0 537 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-206ENST00000420121 CCL19Q99731 98 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 OR11A1Q9GZK7 315 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 SDR39U1Q9NRG7 319 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-206ENST00000420121 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-206ENST00000420121 KLHL9Q9P2J3 617 aa9.78□□□□□ -0.84
SSBP3-206ENST00000420121 CHRNA9Q9UGM1 479 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms