RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ADGRF1Q5T601 910 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 OLIG3Q7RTU3 272 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 HMGN2P46Q86SG4 172 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 JAZF1Q86VZ6 243 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 SKA3Q8IX90 412 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 GJD3Q8N144 294 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 XAGE5Q8WWM1 108 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 NR4A3Q92570 626 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 KISS1RQ969F8 398 aaPredicted RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 SLC25A38Q96DW6 304 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 DERL3Q96Q80 235 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 SEPT5Q99719 369 aaPredicted RBP7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 PCDHB10Q9UN67 800 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 OR51B4Q9Y5P0 310 aa7.44□□□□□ -1.22
HMGXB4-202ENST00000418170 A0A1B0GTQ1 180 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 A0A1W2PPK0 400 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 OR2W5A6NFC9 320 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 FMO6PO60774 539 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 AKR7A3O95154 331 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 PAK4O96013 591 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 CATP04040 527 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 SYN1P17600 705 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 NT5EP21589 574 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 GPR4P46093 362 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 GCGRP47871 477 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 SNRPEP62304 92 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 MRPS10P82664 201 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 ECH1Q13011 328 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 PIP5KL1Q5T9C9 394 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF697Q5TEC3 545 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 TPRG1Q6ZUI0 275 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 USP53Q70EK8 1073 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 OVCH1Q7RTY7 1134 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 OR2W3Q7Z3T1 314 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 CFAP206Q8IYR0 622 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 BBS10Q8TAM1 723 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 EDARADDQ8WWZ3 215 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 DIO2Q92813 273 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 PPP1R16AQ96I34 528 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 BCL2L10Q9HD36 194 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 SEMA4GQ9NTN9 838 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 MIOXQ9UGB7 285 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 SH2B3Q9UQQ2 575 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 NOD1Q9Y239 953 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 AK6Q9Y3D8 172 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 DNAH14Q0VDD8 3507 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM272A0A1B0GTI8 110 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 TRAPPC13A5PLN9 417 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 J3QLW9 94 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 MTX2O75431 263 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 HTR3BO95264 441 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 GJB5O95377 273 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 RB1P06400 928 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 CTSHP09668 335 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 UCHL1P09936 223 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF19P17023 458 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 NDUFV2P19404 249 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 PRR5P85299 388 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 RBMS2Q15434 407 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 FAM109BQ6ICB4 259 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 FIP1L1Q6UN15 594 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 FAM122BQ7Z309 247 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 SAMD14Q8IZD0 417 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 HS6ST3Q8IZP7 471 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 MUC20Q8N307 709 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 AUTS2Q8WXX7 1259 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 SMAD5Q99717 465 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 CPEB1Q9BZB8 566 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 WDR13Q9H1Z4 485 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 MED20Q9H944 212 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 MKL2Q9ULH7 1088 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 TRAV14DV4A0A0A6YYC5 116 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 UBE2CO00762 179 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 TBX19O60806 448 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 STC2O76061 302 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 C1GALT1C1LP0DN25 315 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 AGTR1P30556 359 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 FRKP42685 505 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 MAPK8P45983 427 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 CENPAP49450 140 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 P2RX1P51575 399 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 PCBP4P57723 403 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 OR12D2P58182 307 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 UBE2MP61081 183 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 STXBP1P61764 594 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 ST3GAL3Q11203 375 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF546Q86UE3 836 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 BOLLQ8N9W6 283 aaKnown RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 OR1S2Q8NGQ3 325 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 ACOT11Q8WXI4 607 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 PINK1Q9BXM7 581 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 UBQLN3Q9H347 655 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 SEBOXQ9HB31 216 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 C14orf105Q9NVL8 296 aa7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 ZNF629Q9UEG4 869 aaPredicted RBP7.43□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM202A6NGA9 273 aa7.42□□□□□ -1.22
HMGXB4-202ENST00000418170 C5orf52A6NGY3 159 aa7.42□□□□□ -1.22
HMGXB4-202ENST00000418170 TMEM200CA6NKL6 621 aa7.42□□□□□ -1.22
HMGXB4-202ENST00000418170 EFCAB7A8K855 629 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms