RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 MR1Q95460 341 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 CIDECQ96AQ7 238 aaPredicted RBP5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 ANKRD9Q96BM1 317 aaPredicted RBP5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 RCN3Q96D15 328 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 CNRIP1Q96F85 164 aaPredicted RBP5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 ZBED6CLQ96FA7 236 aaPredicted RBP5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 ITCHQ96J02 903 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 ZNF681Q96N22 645 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 CCDC115Q96NT0 180 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 BBS4Q96RK4 519 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 SLC26A1Q9H2B4 701 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 AKIRIN1Q9H9L7 192 aaPredicted RBP5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 PRTFDC1Q9NRG1 225 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 KRT84Q9NSB2 600 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 ACSS1Q9NUB1 689 aaPredicted RBP5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 C20orf141Q9NUB4 165 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 C14orf105Q9NVL8 296 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 CTSFQ9UBX1 484 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 BTNL2Q9UIR0 455 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 PADI1Q9ULC6 663 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 ENTPD4Q9Y227 616 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 MMACHCQ9Y4U1 282 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 ZNF780BQ9Y6R6 833 aa5.4□□□□□ -1.54
NIFKP3-201ENST00000417799 A0A096LPI6 279 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 IGKV3D-11A0A0A0MRZ8 115 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 CDRT15L2A8MXV6 281 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 C9J4A7 227 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 RFXANKO14593 260 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 TLX3O43711 291 aaPredicted RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 SLC25A17O43808 307 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 HNRNPCL1O60812 293 aaKnown RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 CPSF4O95639 269 aaKnown RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 C6orf47O95873 294 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 NPPAP01160 153 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 CLEC3BP05452 202 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 HEXBP07686 556 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 KRT16P08779 473 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 SLC35E2P0CK97 266 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 EFNA1P20827 205 aaPredicted RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 CD82P27701 267 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 POU1F1P28069 291 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 PTPN4P29074 926 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 MPIP34949 423 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 NUDT2P50583 147 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 NCBP2P52298 156 aaKnown RBP eCLIP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 NANOS3P60323 173 aaKnown RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 PLIN5Q00G26 463 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 SERTAD2Q14140 314 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 SRSF7Q16629 238 aaKnown RBP eCLIP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 LACTB2Q53H82 288 aaPredicted RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 LRIF1Q5T3J3 769 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 MFSD4BQ5TF39 518 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 MZT2BQ6NZ67 158 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 FAM199XQ6PEV8 388 aaPredicted RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 FAM198BQ6UWH4 519 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 DLEU7Q6UYE1 221 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 QSOX2Q6ZRP7 698 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 TIPARPQ7Z3E1 657 aaKnown RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 DHDDSQ86SQ9 333 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 SERPINA11Q86U17 422 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 GPAT4Q86UL3 456 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 ANKRD46Q86W74 232 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 PRSS58Q8IYP2 241 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 CLECL1Q8IZS7 167 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 LRRC25Q8N386 305 aaPredicted RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 C7orf57Q8NEG2 295 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 OR4A15Q8NGL6 344 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 GOT1L1Q8NHS2 421 aaPredicted RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 PSMA8Q8TAA3 256 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 NTN5Q8WTR8 489 aaPredicted RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 OR5P2Q8WZ92 322 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 ROPN1LQ96C74 230 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 LRRC58Q96CX6 371 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 RBM18Q96H35 190 aaKnown RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 AMDHD1Q96NU7 426 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 PANX1Q96RD7 426 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 NPAS2Q99743 824 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 CHCHD6Q9BRQ6 235 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 INPP5KQ9BT40 448 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 VN1R1Q9GZP7 353 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 GLIPR2Q9H4G4 154 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 WDR54Q9H977 334 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 IL1RL2Q9HB29 575 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 GID8Q9NWU2 228 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 TAS2R9Q9NYW1 312 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 MSRB1Q9NZV6 116 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 NXT1Q9UKK6 140 aaKnown RBP5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 PCDHGB4Q9UN71 923 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 ERVK-11Q9UQG0 969 aa5.39□□□□□ -1.55
NIFKP3-201ENST00000417799 A0A0G2JK05 382 aa5.38□□□□□ -1.55
NIFKP3-201ENST00000417799 SYNDIG1LA6NDD5 238 aa5.38□□□□□ -1.55
NIFKP3-201ENST00000417799 ERICH4A6NGS2 130 aa5.38□□□□□ -1.55
NIFKP3-201ENST00000417799 A6NNC1 897 aa5.38□□□□□ -1.55
NIFKP3-201ENST00000417799 IDSB3KWA1 339 aa5.38□□□□□ -1.55
NIFKP3-201ENST00000417799 STMND1H3BQB6 276 aa5.38□□□□□ -1.55
NIFKP3-201ENST00000417799 FXYD1O00168 92 aa5.38□□□□□ -1.55
NIFKP3-201ENST00000417799 LDLRAD4O15165 306 aa5.38□□□□□ -1.55
NIFKP3-201ENST00000417799 OR10H2O60403 315 aa5.38□□□□□ -1.55
NIFKP3-201ENST00000417799 RAD1O60671 282 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms