RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CCL4P13236 92 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 PGCP20142 388 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 EVI2BP34910 448 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 TGFBR2P37173 567 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 CCR4P51679 360 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 E2F1Q01094 437 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 TMED1Q13445 227 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 C1DQ13901 141 aaKnown RBP15.36■□□□□ 0.05
SSBP3-205ENST00000417664 ARMC4Q5T2S8 1044 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 CBLN3Q6UW01 205 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 LIPHQ8WWY8 451 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 ULBP3Q9BZM4 244 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 STRADBQ9C0K7 418 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 ADAM19Q9H013 955 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 CHCHD3Q9NX63 227 aaKnown RBP15.36■□□□□ 0.05
SSBP3-205ENST00000417664 PCDHGB6Q9Y5F9 930 aa15.36■□□□□ 0.05
SSBP3-205ENST00000417664 GALR2O43603 387 aaPredicted RBP15.35■□□□□ 0.05
SSBP3-205ENST00000417664 HCRTR2O43614 444 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 ZFAND5O76080 213 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 CH25HO95992 272 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 BCL10O95999 233 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 PEPDP12955 493 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 HTR1FP30939 366 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 TMED10P49755 219 aaKnown RBP15.35■□□□□ 0.05
SSBP3-205ENST00000417664 CDH11P55287 796 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 ANKDD1AQ495B1 522 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 ARMCX4Q5H9R4 360 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 LCN10Q6JVE6 187 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 SLC46A3Q7Z3Q1 461 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 BCDIN3DQ7Z5W3 292 aaKnown RBP15.35■□□□□ 0.05
SSBP3-205ENST00000417664 NANOGP1Q8N7R0 232 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 OR52I1Q8NGK6 324 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 OR5W2Q8NH69 310 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 ZNF563Q8TA94 476 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 TMCO6Q96DC7 493 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 MGLLQ99685 303 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 DCUN1D5Q9BTE7 237 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 IFT27Q9BW83 186 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 RYDENQ9NUL5 291 aaKnown RBP15.35■□□□□ 0.05
SSBP3-205ENST00000417664 GPR52Q9Y2T5 361 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 ZNF337Q9Y3M9 751 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 HEATR5AQ86XA9 2040 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 TRBV11-1A0A0K0K1C0 115 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 CDC40O60508 579 aaKnown RBP eCLIP15.35■□□□□ 0.05
SSBP3-205ENST00000417664 NDUFB2O95178 105 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 ZNF806P0C7X5 589 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 ZNF28P17035 718 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 MYL12AP19105 171 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 PTNP21246 168 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 LIPAP38571 399 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 P2RX1P51575 399 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 PRPS1P60891 318 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 FOXK2Q01167 660 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 ZNF117Q03924 483 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.35■□□□□ 0.05
SSBP3-205ENST00000417664 CBFBQ13951 182 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 TIMM50Q3ZCQ8 353 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 ARHGAP11AQ6P4F7 1023 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 CXXC5Q7LFL8 322 aaKnown RBP15.35■□□□□ 0.05
SSBP3-205ENST00000417664 OR51A7Q8NH64 312 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 TTC9Q92623 222 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 MR1Q95460 341 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 LGALS12Q96DT0 336 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 ARSGQ96EG1 525 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 RNFT2Q96EX2 444 aa15.35■□□□□ 0.05
SSBP3-205ENST00000417664 LSM2Q9Y333 95 aaKnown RBP15.35■□□□□ 0.05
SSBP3-205ENST00000417664 EXOSC1Q9Y3B2 195 aaKnown RBP15.35■□□□□ 0.05
SSBP3-205ENST00000417664 TRAV27A0A087WT01 109 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 MYL12BO14950 172 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 OIP5O43482 229 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 OR7A10O76100 309 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 IFNGP01579 166 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 CD59P13987 128 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 RGS6P49758 472 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 FOXL2P58012 376 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 SPHARQ15513 63 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 MED22Q15528 200 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 ISXQ2M1V0 245 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 DCAF12Q5T6F0 453 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 FAM198BQ6UWH4 519 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 THSD4Q6ZMP0 1018 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 MARCH3Q86UD3 253 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 RNF31Q96EP0 1072 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 TNFRSF13CQ96RJ3 184 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 ZBTB20Q9HC78 741 aaPredicted RBP15.34■□□□□ 0.05
SSBP3-205ENST00000417664 MCCC2Q9HCC0 563 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 IL20RAQ9UHF4 553 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 R4GN57 208 aa15.34■□□□□ 0.05
SSBP3-205ENST00000417664 TMEM129A0AVI4 362 aa15.33■□□□□ 0.04
SSBP3-205ENST00000417664 RIIAD1A6NNX1 92 aa15.33■□□□□ 0.04
SSBP3-205ENST00000417664 CDX4O14627 284 aaPredicted RBP15.33■□□□□ 0.04
SSBP3-205ENST00000417664 SCG5P05408 212 aa15.33■□□□□ 0.04
SSBP3-205ENST00000417664 ZNF3P17036 446 aa15.33■□□□□ 0.04
SSBP3-205ENST00000417664 HK1P19367 917 aa15.33■□□□□ 0.04
SSBP3-205ENST00000417664 FUT1P19526 365 aa15.33■□□□□ 0.04
SSBP3-205ENST00000417664 GAS1P54826 345 aa15.33■□□□□ 0.04
SSBP3-205ENST00000417664 FHL1Q13642 323 aa15.33■□□□□ 0.04
SSBP3-205ENST00000417664 CPOQ8IVL8 374 aa15.33■□□□□ 0.04
SSBP3-205ENST00000417664 NAXDQ8IW45 347 aa15.33■□□□□ 0.04
SSBP3-205ENST00000417664 SLC15A4Q8N697 577 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms