RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 NGFRP08138 427 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 CPN1P15169 458 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 ATP5J2P56134 94 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 REP15Q6BDI9 236 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 ZNF619Q8N2I2 560 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 DPP10Q8N608 796 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 SLC38A5Q8WUX1 472 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 WNT2BQ93097 391 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 UCN2Q96RP3 112 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 CGREF1Q99674 301 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 CCDC106Q9BWC9 280 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 OR2B2Q9GZK3 357 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 HOXD1Q9GZZ0 328 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 PIF1Q9H611 641 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 VDAC3Q9Y277 283 aa16.08■□□□□ 0.16
VCP-202ENST00000417448 PRR14LQ5THK1 2151 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 A0A1W2PNV4 684 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 MSTNO14793 375 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 MRASO14807 208 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 HCRTR2O43614 444 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 CD5LO43866 347 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 KIAA0513O60268 411 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 ACTL6AO96019 429 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 AK1P00568 194 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 OPN1LWP04000 364 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 TFPTP0C1Z6 253 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 LCN1P31025 176 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 SRD5A2P31213 254 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 SRYQ05066 204 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 TOMM34Q15785 309 aaPredicted RBP16.07■□□□□ 0.16
VCP-202ENST00000417448 ZNF141Q15928 474 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 MMEL1Q495T6 779 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 ZNF474Q6S9Z5 364 aaPredicted RBP16.07■□□□□ 0.16
VCP-202ENST00000417448 PIGWQ7Z7B1 504 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 TMEM171Q8WVE6 324 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 RCN3Q96D15 328 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 ZC3HAV1LQ96H79 300 aaKnown RBP16.07■□□□□ 0.16
VCP-202ENST00000417448 TMEM19Q96HH6 336 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 TRNT1Q96Q11 434 aaKnown RBP16.07■□□□□ 0.16
VCP-202ENST00000417448 CCT8L2Q96SF2 557 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 SAP130Q9H0E3 1048 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 YAE1D1Q9NRH1 226 aa16.07■□□□□ 0.16
VCP-202ENST00000417448 A0A1W2PQD3 144 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 SERINC4A6NH21 518 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 H0Y3Z8 333 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 HAX1O00165 279 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 TLX2O43763 284 aaPredicted RBP16.06■□□□□ 0.16
VCP-202ENST00000417448 CCDC22O60826 627 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 TGM6O95932 706 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 COX4I1P13073 169 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 UGT2B10P36537 528 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 CD79BP40259 229 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 PCYT1AP49585 367 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 ANXA11P50995 505 aaKnown RBP16.06■□□□□ 0.16
VCP-202ENST00000417448 DSCR4P56555 118 aaPredicted RBP16.06■□□□□ 0.16
VCP-202ENST00000417448 B3GALT5-AS1P59052 145 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 HPCAP84074 193 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 CYLC2Q14093 348 aaPredicted RBP16.06■□□□□ 0.16
VCP-202ENST00000417448 VEZF1Q14119 521 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 CLEC12BQ2HXU8 276 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 VWA1Q6PCB0 445 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 LRRC74BQ6ZQY2 392 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 VRK2Q86Y07 508 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 TMCO5AQ8N6Q1 288 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 ZNF527Q8NB42 609 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 B4GALNT2Q8NHY0 566 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 NFKBIDQ8NI38 313 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 TSPEARQ8WU66 669 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 STARD4Q96DR4 205 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 C1GALT1C1Q96EU7 318 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 SFXN2Q96NB2 322 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 ANKRD27Q96NW4 1050 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 THUMPD3Q9BV44 507 aaKnown RBP16.06■□□□□ 0.16
VCP-202ENST00000417448 REG4Q9BYZ8 158 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 MYLK2Q9H1R3 596 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 P2RX2Q9UBL9 471 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 USP22Q9UPT9 525 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 LIPT1Q9Y234 373 aa16.06■□□□□ 0.16
VCP-202ENST00000417448 IGLV3-32A0A0A0MS00 114 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 SMNDC1O75940 238 aaKnown RBP eCLIP16.05■□□□□ 0.163e-9■■■□□ 15.9
VCP-202ENST00000417448 UBTFL6P0CB48 400 aaPredicted RBP16.05■□□□□ 0.16
VCP-202ENST00000417448 CCR4P51679 360 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 PLAURQ03405 335 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 CHRFAM7AQ494W8 412 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 RABL3Q5HYI8 236 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 GCNT6Q5T4J0 391 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 RAET1LQ5VY80 246 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 NANOGP8Q6NSW7 305 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 IFNEQ86WN2 208 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 CNOT9Q92600 299 aaKnown RBP16.05■□□□□ 0.16
VCP-202ENST00000417448 RSPO3Q9BXY4 272 aaPredicted RBP16.05■□□□□ 0.16
VCP-202ENST00000417448 CXorf56Q9H5V9 222 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 PTGES2Q9H7Z7 377 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 NANOGQ9H9S0 305 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 GMPR2Q9P2T1 348 aaKnown RBP16.05■□□□□ 0.16
VCP-202ENST00000417448 ZNF337Q9Y3M9 751 aa16.05■□□□□ 0.16
VCP-202ENST00000417448 EVPLLA8MZ36 301 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 H0YC42 278 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 H3BNH8 94 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 FXYD1O00168 92 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms