RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 NKAIN4Q8IVV8 208 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 ICA1LQ8NDH6 482 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 GIPC3Q8TF64 312 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 EXTL1Q92935 676 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 EME1Q96AY2 570 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 ABHD17AQ96GS6 310 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 TMEM43Q9BTV4 400 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 GABARAPL1Q9H0R8 117 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 PRORYQ9H606 182 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 KLHL1Q9NR64 748 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 OSGIN1Q9UJX0 560 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 CSAG2Q9Y5P2 127 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 CNTRLQ7Z7A1 2325 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 CFAP47Q6ZTR5 3102 aa12.93□□□□□ -0.34
SF3B1-204ENST00000414963 SAC3D1A6NKF1 404 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 GMFGO60234 142 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 CCNB2O95067 398 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 RASAL1O95294 804 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 IGF2P01344 180 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 PDGFAP04085 211 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF23P17027 643 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 PEX2P28328 305 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 PTDSS1P48651 473 aaKnown RBP12.92□□□□□ -0.34
SF3B1-204ENST00000414963 CD97P48960 835 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 PPP1R8Q12972 351 aaKnown RBP12.92□□□□□ -0.34
SF3B1-204ENST00000414963 LPCAT4Q643R3 524 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 FAHD1Q6P587 224 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 TBPL2Q6SJ96 375 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 ZBTB49Q6ZSB9 765 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 MBOAT2Q6ZWT7 520 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 STK32CQ86UX6 486 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 ADGRG3Q86Y34 549 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 GTPBP8Q8N3Z3 284 aaPredicted RBP12.92□□□□□ -0.34
SF3B1-204ENST00000414963 PACRGLQ8N7B6 248 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 POC1BQ8TC44 478 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 TMEM239Q8WW34 195 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 JSRP1Q96MG2 331 aaPredicted RBP12.92□□□□□ -0.34
SF3B1-204ENST00000414963 BARD1Q99728 777 aaKnown RBP12.92□□□□□ -0.34
SF3B1-204ENST00000414963 CIB1Q99828 191 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 SLC19A3Q9BZV2 496 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 OR2B2Q9GZK3 357 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 ADNPQ9H2P0 1102 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 QPCTLQ9NXS2 382 aa12.92□□□□□ -0.34
SF3B1-204ENST00000414963 PDP1Q9P0J1 537 aaPredicted RBP12.92□□□□□ -0.34
SF3B1-204ENST00000414963 HEATR5AQ86XA9 2040 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 HPNP05981 417 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 RFPL3SP0C7P2 107 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF17P17021 662 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF26P17031 533 aaPredicted RBP12.91□□□□□ -0.34
SF3B1-204ENST00000414963 FKBP2P26885 142 aaKnown RBP12.91□□□□□ -0.34
SF3B1-204ENST00000414963 IFNGR2P38484 337 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 MEOX1P50221 254 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 CTBP2P56545 445 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 PPP2R2BQ00005 443 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 FOXK2Q01167 660 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 MERTKQ12866 999 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 KCNAB2Q13303 367 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF169Q14929 603 aaPredicted RBP12.91□□□□□ -0.34
SF3B1-204ENST00000414963 LINC00303Q3SY05 128 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF730Q6ZMV8 503 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.91□□□□□ -0.34
SF3B1-204ENST00000414963 HS3ST5Q8IZT8 346 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 CBR4Q8N4T8 237 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 RBMXL3Q8N7X1 1067 aaKnown RBP12.91□□□□□ -0.34
SF3B1-204ENST00000414963 OR10G2Q8NGC3 310 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 OR4K5Q8NGD3 323 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 TMEM255BQ8WV15 326 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 SDCCAG3Q96C92 435 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 SLC29A1Q99808 456 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 TTTY12Q9BZ98 90 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 VCX3BQ9H321 246 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF703Q9H7S9 590 aaPredicted RBP12.91□□□□□ -0.34
SF3B1-204ENST00000414963 COQ10BQ9H8M1 238 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 USE1Q9NZ43 259 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 B4GALT7Q9UBV7 327 aa12.91□□□□□ -0.34
SF3B1-204ENST00000414963 MAGED1Q9Y5V3 778 aaPredicted RBP12.91□□□□□ -0.34
SF3B1-204ENST00000414963 IGKV1D-42A0A075B6H8 117 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 TMED7-TICAM2A0A0A6YYA0 188 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 ELOA3DA6NLF2 546 aaPredicted RBP12.9□□□□□ -0.34
SF3B1-204ENST00000414963 H0YJX3 145 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 K7EM74 188 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 PDLIM1O00151 329 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 SOCS2O14508 198 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 ZNF208O43345 1280 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 NPIPB7O75200 414 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 WISP1O95388 367 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 HPRP00739 348 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 ALPLP05186 524 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 ANXA8P13928 327 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 HK1P19367 917 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 PRKACGP22612 351 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 CBLP22681 906 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 CXCR1P25024 350 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 B3GALT5-AS1P59052 145 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 PRKCDQ05655 676 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 FOXF1Q12946 379 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 ELOA3BQ3SY89 546 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 RPUSD3Q6P087 351 aaKnown RBP12.9□□□□□ -0.34
SF3B1-204ENST00000414963 C1orf94Q6P1W5 598 aa12.9□□□□□ -0.34
SF3B1-204ENST00000414963 TTC33Q6PID6 262 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms