RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RNASE6Q93091 150 aaKnown RBP13.21□□□□□ -0.29
CHD1-202ENST00000414220 LRRC58Q96CX6 371 aa13.21□□□□□ -0.29
CHD1-202ENST00000414220 DDIT4LQ96D03 193 aa13.21□□□□□ -0.29
CHD1-202ENST00000414220 ZNF845Q96IR2 970 aaPredicted RBP13.21□□□□□ -0.29
CHD1-202ENST00000414220 ECSITQ9BQ95 431 aa13.21□□□□□ -0.29
CHD1-202ENST00000414220 ENKD1Q9H0I2 346 aa13.21□□□□□ -0.29
CHD1-202ENST00000414220 RNF122Q9H9V4 155 aa13.21□□□□□ -0.29
CHD1-202ENST00000414220 CHRNA9Q9UGM1 479 aa13.21□□□□□ -0.29
CHD1-202ENST00000414220 PACSIN3Q9UKS6 424 aa13.21□□□□□ -0.29
CHD1-202ENST00000414220 AP3M1Q9Y2T2 418 aa13.21□□□□□ -0.29
CHD1-202ENST00000414220 FLNBO75369 2602 aaKnown RBP13.21□□□□□ -0.3
CHD1-202ENST00000414220 A0A1W2PNV4 684 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 CXCR1P25024 350 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 PRKAR1BP31321 381 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 POLR2HP52434 150 aaKnown RBP13.2□□□□□ -0.3
CHD1-202ENST00000414220 AGFG1P52594 562 aaKnown RBP13.2□□□□□ -0.3
CHD1-202ENST00000414220 SEC24CP53992 1094 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 DLX5P56178 289 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 MTPNP58546 118 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 RAC3P60763 192 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 RNPS1Q15287 305 aaKnown RBP13.2□□□□□ -0.3
CHD1-202ENST00000414220 REP15Q6BDI9 236 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 WBP2NLQ6ICG8 309 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 FAM214BQ7L5A3 538 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 SERPINA11Q86U17 422 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 SLC43A2Q8N370 569 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 OR8J3Q8NGG0 315 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 GMPPAQ96IJ6 420 aaPredicted RBP13.2□□□□□ -0.3
CHD1-202ENST00000414220 ADGRG7Q96K78 797 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 OR5B2Q96R09 309 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 NPAS1Q99742 590 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 TACO1Q9BSH4 297 aaKnown RBP13.2□□□□□ -0.3
CHD1-202ENST00000414220 ASH1LQ9NR48 2969 aaKnown RBP13.2□□□□□ -0.3
CHD1-202ENST00000414220 RPS6KB2Q9UBS0 482 aa13.2□□□□□ -0.3
CHD1-202ENST00000414220 PCNX1Q96RV3 2341 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 COL12A1Q99715 3063 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 PTPN13Q12923 2485 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 SPTAN1Q13813 2472 aaKnown RBP13.19□□□□□ -0.3
CHD1-202ENST00000414220 C19orf84I3L1E1 186 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 SULT2B1O00204 365 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 ZNF208O43345 1280 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 SMNDC1O75940 238 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHD1-202ENST00000414220 PRKD3O94806 890 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 IL11P20809 199 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 ENPP1P22413 925 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 SSTR2P30874 369 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 NCALDP61601 193 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 FOXF2Q12947 444 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 CAPRIN1Q14444 709 aaKnown RBP13.19□□□□□ -0.3
CHD1-202ENST00000414220 CTU2Q2VPK5 515 aaKnown RBP13.19□□□□□ -0.3
CHD1-202ENST00000414220 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 SYT14P1Q58G82 188 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 TMEM201Q5SNT2 666 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 NANOGP8Q6NSW7 305 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 ERICH5Q6P6B1 374 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 GDF7Q7Z4P5 450 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 ARPINQ7Z6K5 226 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 PATL1Q86TB9 770 aaKnown RBP13.19□□□□□ -0.3
CHD1-202ENST00000414220 STK32CQ86UX6 486 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 ARMC8Q8IUR7 673 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 CADM2Q8N3J6 435 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 RELL2Q8NC24 303 aaPredicted RBP13.19□□□□□ -0.3
CHD1-202ENST00000414220 OR10A6Q8NH74 314 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 RASSF5Q8WWW0 418 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 CMTM5Q96DZ9 223 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 KLHDC3Q9BQ90 382 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 SLC39A3Q9BRY0 314 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 CCDC106Q9BWC9 280 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 RBM24Q9BX46 236 aaKnown RBP13.19□□□□□ -0.3
CHD1-202ENST00000414220 KAT8Q9H7Z6 458 aaKnown RBP13.19□□□□□ -0.3
CHD1-202ENST00000414220 NANOGQ9H9S0 305 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 EFCAB1Q9HAE3 211 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 GP6Q9HCN6 339 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 CTPS2Q9NRF8 586 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 SELENONQ9NZV5 590 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 PROCRQ9UNN8 238 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 HDGFL3Q9Y3E1 203 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 HECTD1Q9ULT8 2610 aa13.19□□□□□ -0.3
CHD1-202ENST00000414220 TMED7-TICAM2A0A0A6YYA0 188 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 FBP2O00757 339 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 NDUFAB1O14561 156 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 AP3D1O14617 1153 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 MSTNO14793 375 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 EFNA2O43921 213 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 IFNA14P01570 189 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 GKN3PP0CG01 181 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 CD1EP15812 388 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 TACR3P29371 465 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 KCNJ5P48544 419 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 SIRPAP78324 504 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 TFF3Q07654 80 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 MYBPHQ13203 477 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 DHRS4L2Q6PKH6 230 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 PLXDC2Q6UX71 529 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 TMPPEQ6ZT21 453 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 FCRLAQ7L513 359 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 LUZP2Q86TE4 346 aa13.18□□□□□ -0.3
CHD1-202ENST00000414220 MTDHQ86UE4 582 aaKnown RBP13.18□□□□□ -0.3
CHD1-202ENST00000414220 DMRTC2Q8IXT2 367 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms