RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CNTN1Q12860 1018 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 DLG1Q12959 904 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PKP1Q13835 747 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 GK2Q14410 553 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PSG5Q15238 335 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 DLG2Q15700 870 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 MPPED2Q15777 294 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 CARTPTQ16568 116 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 VPS26BQ4G0F5 336 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 C14orf28Q4W4Y0 310 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 AGKQ53H12 422 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 FGD3Q5JSP0 725 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SIRPB2Q5JXA9 342 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 WASHC2DQ5SRD0 308 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 UTF1Q5T230 341 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 OR4F3Q6IEY1 312 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ZNF770Q6IQ21 691 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 FAM45BPQ6NSW5 357 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ZNF774Q6NX45 483 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ZNF790Q6PG37 636 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 FAM198BQ6UWH4 519 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 TFAP2EQ6VUC0 442 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 TMPRSS11AQ6ZMR5 421 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ZNF836Q6ZNA1 936 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 LARP4Q71RC2 724 aaKnown RBP eCLIP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 DOK3Q7L591 496 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 GRINAQ7Z429 371 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 MRPL52Q86TS9 123 aaKnown RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 RANBP3LQ86VV4 465 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 COMMD2Q86X83 199 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PTOV1Q86YD1 416 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 RAB43Q86YS6 212 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 TRAPPC5Q8IUR0 188 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 WDFY1Q8IWB7 410 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 RIMKLAQ8IXN7 391 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 RDH10Q8IZV5 341 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 CSNK1A1LQ8N752 337 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 CDRT4Q8N9R6 151 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 LRRC75AQ8NAA5 344 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SLC38A9Q8NBW4 561 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 OR2AP1Q8NGE2 309 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 OR5L1Q8NGL2 311 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 OR4A16Q8NH70 328 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 CD200R1Q8TD46 325 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SPRYD4Q8WW59 207 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PIH1D2Q8WWB5 315 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 C1orf54Q8WWF1 131 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 FCAMRQ8WWV6 532 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ST8SIA2Q92186 375 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PIK3R3Q92569 461 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 NR4A3Q92570 626 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 CNOT9Q92600 299 aaKnown RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ZG16BQ96DA0 208 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PRMT6Q96LA8 375 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SDHCQ99643 169 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ECSITQ9BQ95 431 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PAAF1Q9BRP4 392 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 THAP7Q9BT49 309 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 FUCA2Q9BTY2 467 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 GTPBP2Q9BX10 602 aaKnown RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ACTR6Q9GZN1 396 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 MS4A7Q9GZW8 240 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SPATC1LQ9H0A9 340 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PIGMQ9H3S5 423 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 LDAHQ9H6V9 325 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SEC61A2Q9H9S3 476 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ELOVL3Q9HB03 270 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SEBOXQ9HB31 216 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 RANGRFQ9HD47 186 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 RAB18Q9NP72 206 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 NIT2Q9NQR4 276 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SIRT7Q9NRC8 400 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SLC2A9Q9NRM0 540 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 DDIT4Q9NX09 232 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 B3GNT2Q9NY97 397 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 GLTPQ9NZD2 209 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 GSKIPQ9P0R6 139 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PEMTQ9UBM1 199 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 NKX1-2Q9UD57 310 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 KLQ9UEF7 1012 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 DKKL1Q9UK85 242 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 POU2F3Q9UKI9 436 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 NPIPA1Q9UND3 350 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SLC7A11Q9UPY5 501 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PDE10AQ9Y233 779 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 MAP3K2Q9Y2U5 619 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 LRP12Q9Y561 859 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SPATA31A6Q5VVP1 1343 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 MROH7Q68CQ1 1323 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 CARMIL3Q8ND23 1372 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ZNF609O15014 1411 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 RAPGEF2Q9Y4G8 1499 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 CEP152O94986 1710 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 A2MP01023 1474 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 ARAP1Q96P48 1450 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 RTL1A6NKG5 1358 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 JCADQ9P266 1359 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 LOC105371242A0A075B767 164 aa3.31□□□□□ -1.88
SF3B1-203ENST00000414174 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.31□□□□□ -1.88
SF3B1-203ENST00000414174 hCG_38984A0A1B0GV85 526 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms