RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 SRFBP1Q8NEF9 429 aaKnown RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 NETO1Q8TDF5 533 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 GGHQ92820 318 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 AP2M1Q96CW1 435 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ELMOD3Q96FG2 381 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 TMEM80Q96HE8 168 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 MCCC1Q96RQ3 725 aaPredicted RBP8.7□□□□□ -1.02
SNHG3-201ENST00000413987 SRRQ9GZT4 340 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 ASB8Q9H765 288 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 MAT2BQ9NZL9 334 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 NUMA1Q14980 2115 aa8.7□□□□□ -1.02
SNHG3-201ENST00000413987 A0A096LPI6 279 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 A0A1B0GTL3 188 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 ANKDD1BA6NHY2 528 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 B4DXG7 233 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 RGS5O15539 181 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 RNF13O43567 381 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 RPP14O95059 124 aaKnown RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 APODP05090 189 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 FABP3P05413 133 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 SRPRAP08240 638 aaKnown RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 ADORA3P0DMS8 318 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 OGNP20774 298 aaKnown RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 C21orf33P30042 268 aaPredicted RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 DLSTP36957 453 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 SLC1A3P43003 542 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 RORCP51449 518 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 PRPS1P60891 318 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 IKZF1Q13422 519 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 SLC5A12Q1EHB4 618 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 EOGTQ5NDL2 527 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 FAHD1Q6P587 224 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 C19orf48Q6RUI8 117 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 SCIMPQ6UWF3 145 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 GCNT7Q6ZNI0 430 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 EIF3MQ7L2H7 374 aaKnown RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 TRIM69Q86WT6 500 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 VRK2Q86Y07 508 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 GDPD1Q8N9F7 314 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 LHFPL5Q8TAF8 219 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 WFIKKN2Q8TEU8 576 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 UBASH3BQ8TF42 649 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 MRGPRFQ96AM1 343 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 ECHDC3Q96DC8 303 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 CDKN2AIPNLQ96HQ2 116 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 C5orf34Q96MH7 638 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 FOXN4Q96NZ1 517 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 CD180Q99467 661 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 WRAP53Q9BUR4 548 aaKnown RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 C1QTNF7Q9BXJ2 289 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 GABARAPL3Q9BY60 117 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 MMP28Q9H239 520 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 KCNN2Q9H2S1 579 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 ACTL8Q9H568 366 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 GEMIN7Q9H840 131 aaKnown RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 VNN3Q9NY84 501 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 KCMF1Q9P0J7 381 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 IKZF3Q9UKT9 509 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 RHBDD3Q9Y3P4 386 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 V9GYH0 126 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 COL4A2P08572 1712 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 CD8B2A6NJW9 211 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 OR1I1O60431 355 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 WDR47O94967 919 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 EBLN1P0CF75 366 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 PEPDP12955 493 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 GGT2P36268 569 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 TALDO1P37837 337 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 KIR2DL1P43626 348 aaPredicted RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 CSNK1DP48730 415 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 PXNP49023 591 aaPredicted RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 TAF1AQ15573 450 aaPredicted RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 CDKN3Q16667 212 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 AP5B1Q2VPB7 878 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 RGS7BPQ6MZT1 257 aaPredicted RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 CDPF1Q6NVV7 123 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 ABI3BPQ7Z7G0 1075 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF605Q86T29 641 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 ARRDC3Q96B67 414 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 THOC3Q96J01 351 aaKnown RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 HYLS1Q96M11 299 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 RACGAP1Q9H0H5 632 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 METTL8Q9H825 291 aaKnown RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 REEP1Q9H902 201 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 PRSS16Q9NQE7 514 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 LIN7CQ9NUP9 197 aaKnown RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 TAS2R13Q9NYV9 303 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 OR6C3Q9NZP0 311 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 THAP10Q9P2Z0 257 aaPredicted RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 MUTYHQ9UIF7 546 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 ZNF225Q9UK10 706 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 PLAGL1Q9UM63 463 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 NDRG2Q9UN36 371 aaKnown RBP8.69□□□□□ -1.02
SNHG3-201ENST00000413987 AUP1Q9Y679 476 aa8.69□□□□□ -1.02
SNHG3-201ENST00000413987 C5orf52A6NGY3 159 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 E5RI56 91 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 SELENOFO60613 162 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 OR4F21O95013 312 aa8.68□□□□□ -1.02
SNHG3-201ENST00000413987 NQO2P16083 231 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms