RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 HS6ST2Q96MM7 605 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 TEX12Q9BXU0 123 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 MEPEQ9NQ76 525 aaPredicted RBP13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 MGAT4CQ9UBM8 478 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 ZNF69Q9UC07 566 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 CFAP54Q96N23 3096 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 OR5K3A6NET4 321 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 PRKNO60260 465 aaPredicted RBP13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 LDB3O75112 727 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 CEBPBP17676 345 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 PTBP1P26599 531 aaKnown RBP eCLIP13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 LCN1P31025 176 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 KLF9Q13886 244 aaPredicted RBP13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 ODF4Q2M2E3 257 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 COL28A1Q2UY09 1125 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 MRPL2Q5T653 305 aaKnown RBP13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 TMEM81Q6P7N7 255 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 APOOLQ6UXV4 268 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 DNAAF1Q8NEP3 725 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 ADAMTS14Q8WXS8 1223 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 RBPMSQ93062 196 aaKnown RBP13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 AHCYL2Q96HN2 611 aaKnown RBP13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 PPP1R16AQ96I34 528 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 LINC00615Q96LM1 132 aaPredicted RBP13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 ZNF681Q96N22 645 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 C1QTNF2Q9BXJ5 285 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 TMEM168Q9H0V1 697 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 RPS6KB2Q9UBS0 482 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 SERGEFQ9UGK8 458 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 GNG8Q9UK08 70 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 NUP50Q9UKX7 468 aa13.49□□□□□ -0.25
SEMA3F-202ENST00000413852 PRUNE2Q8WUY3 3088 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 A0A1B0GVT2 93 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 MEIS3P1A6NDR6 274 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 PCP4L1A6NKN8 68 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 SLC9A3R1O14745 358 aaPredicted RBP13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 MID1O15344 667 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 M6PRP20645 277 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 F8A1P23610 371 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 PEBP1P30086 187 aaKnown RBP13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 MPIP34949 423 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 EXOSC7Q15024 291 aaKnown RBP13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 ANKRD33Q7Z3H0 272 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 OR56A1Q8NGH5 318 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 OR52L1Q8NGH7 329 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 MOSPD2Q8NHP6 518 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 ZPLD1Q8TCW7 415 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 PXYLP1Q8TE99 480 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 TMEM239Q8WW34 195 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 SIPA1Q96FS4 1042 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 SARGQ9BW04 601 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 ZBP1Q9H171 429 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 PLPP2O43688 288 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 HMGN1P05114 100 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 ZNF888P0CJ79 500 aaPredicted RBP13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 DCTDP32321 178 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 OPCMLQ14982 345 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 MLC1Q15049 377 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 FCRLAQ7L513 359 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 OTUB2Q96DC9 234 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 LRIG1Q96JA1 1093 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 GFI1Q99684 422 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 WDR26Q9H7D7 661 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 ANKRD10Q9NXR5 420 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 GPR34Q9UPC5 381 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 ADAM18Q9Y3Q7 739 aa13.48□□□□□ -0.25
SEMA3F-202ENST00000413852 A0A1B0GTH9 108 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 IFNA7P01567 189 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 RRASP10301 218 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 CFL1P23528 166 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 DEFB134Q4QY38 66 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 PRSS41Q7RTY9 318 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 OR52E1Q8NGJ3 308 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 OR52E2Q8NGJ4 325 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 BPIFA2Q96DR5 249 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 ACTRT3Q9BYD9 372 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 HRASLSQ9HDD0 168 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 AUP1Q9Y679 476 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 ZNF780BQ9Y6R6 833 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 CLEC3AO75596 197 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 CXCL10P02778 98 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 NGFRP08138 427 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 ERGP11308 486 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 ADH5P11766 374 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 ICAM2P13598 275 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 EPCAMP16422 314 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 NDUFS1P28331 727 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 MAT2AP31153 395 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 GDI2P50395 445 aaKnown RBP13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 MFSD12Q6NUT3 480 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 CFAP77Q6ZQR2 320 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 BTN2A1Q7KYR7 527 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 OR4E2Q8NGC2 313 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 NOX4Q9NPH5 578 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 ST6GALNAC2Q9UJ37 374 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 ZNF223Q9UK11 482 aaPredicted RBP13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 PCDHGA5Q9Y5G8 931 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 PRNPP04156 253 aa13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 HOXD4P09016 255 aaPredicted RBP13.47□□□□□ -0.25
SEMA3F-202ENST00000413852 RAB14P61106 215 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms