RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 MAL2Q969L2 176 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 TMEM19Q96HH6 336 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 OR11A1Q9GZK7 315 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 PAIP1Q9H074 479 aaKnown RBP9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 PLEKHF2Q9H8W4 249 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 GLRX2Q9NS18 164 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 SLAMF8Q9P0V8 285 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 KLHL13Q9P2N7 655 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 P2RX2Q9UBL9 471 aa9.07□□□□□ -0.96
NCKIPSD-202ENST00000413374 LRBAP50851 2863 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 ARHGAP21Q5T5U3 1957 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 TMEM72A0PK05 275 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 ETV2O00321 342 aaPredicted RBP9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 SMAD9O15198 467 aaKnown RBP9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 DNAJA2O60884 412 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 DBIP07108 87 aaKnown RBP9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 THBDP07204 575 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 FESP07332 822 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 YES1P07947 543 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 TFPTP0C1Z6 253 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZCCHC18P0CG32 403 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 NID1P14543 1247 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 APOBEC1P41238 236 aaKnown RBP9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 DIO1P49895 249 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 OR2B6P58173 313 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 RAC3P60763 192 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 RASGEF1BQ0VAM2 473 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 GNA13Q14344 377 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 RNPS1Q15287 305 aaKnown RBP9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 RGNQ15493 299 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 SYT14P1Q58G82 188 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 MRPL2Q5T653 305 aaKnown RBP9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZNF836Q6ZNA1 936 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 TMPPEQ6ZT21 453 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 BEND4Q6ZU67 534 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 GRINAQ7Z429 371 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 STK32CQ86UX6 486 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 CXorf67Q86X51 503 aaPredicted RBP9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 WFDC8Q8IUA0 241 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 PEX5LQ8IYB4 626 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 CLIP4Q8N3C7 705 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 FAM71CQ8NEG0 241 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 SLC38A5Q8WUX1 472 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 SPDL1Q96EA4 605 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 ARL5BQ96KC2 179 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 MAGEB18Q96M61 343 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 HS3ST6Q96QI5 342 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZNF300Q96RE9 604 aaPredicted RBP9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 CCDC28BQ9BUN5 200 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 CCDC106Q9BWC9 280 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 VIPAS39Q9H9C1 493 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 EXOSC3Q9NQT5 275 aaKnown RBP9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZNF226Q9NYT6 803 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 DCTN4Q9UJW0 460 aa9.06□□□□□ -0.96
NCKIPSD-202ENST00000413374 TMED7-TICAM2A0A0A6YYA0 188 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 TMEM247A6NEH6 219 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 CFAP73A6NFT4 308 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 DEFB108AA8MXU0 73 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZNF814B7Z6K7 855 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 ADAP00813 363 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 IGHV3-9P01782 118 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 PRG2P13727 222 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 EDNRAP25101 427 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 TACR3P29371 465 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 CRISP3P54108 245 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 TXNL4AP83876 142 aaKnown RBP9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 HOXC5Q00444 222 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 EPS8Q12929 822 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 AP1ARQ63HQ0 302 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 BLOC1S3Q6QNY0 202 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 TFAP2EQ6VUC0 442 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 MSANTD1Q6ZTZ1 278 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 CCDC103Q8IW40 242 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 MSRB3Q8IXL7 192 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 C10orf111Q8N326 155 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 SLC43A2Q8N370 569 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 CADM2Q8N3J6 435 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 PSD2Q9BQI7 771 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 ACTR6Q9GZN1 396 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 UBTD1Q9HAC8 227 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 NPHS2Q9NP85 383 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 SLC52A3Q9NQ40 469 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 SLC25A37Q9NYZ2 338 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 KLHL9Q9P2J3 617 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 CHRNA9Q9UGM1 479 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 PRSS50Q9UI38 385 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 OSGIN1Q9UJX0 560 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 ING1Q9UK53 422 aaPredicted RBP9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 EDARQ9UNE0 448 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZNF232Q9UNY5 417 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZNF443Q9Y2A4 671 aaPredicted RBP9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 TMED7Q9Y3B3 224 aa9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 SPIN1Q9Y657 262 aaPredicted RBP9.05□□□□□ -0.96
NCKIPSD-202ENST00000413374 NUP214P35658 2090 aaPredicted RBP9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 A0A096LPI6 279 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 A0A0G2JPF8 293 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 ZC3H12DA2A288 527 aaKnown RBP9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 HNRNPCL2B2RXH8 293 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 HNRNPCL3B7ZW38 293 aa9.04□□□□□ -0.96
NCKIPSD-202ENST00000413374 C5orf58C9J3I9 102 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms