RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ELOA3BQ3SY89 546 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 CRTC2Q53ET0 693 aaPredicted RBP6.05□□□□□ -1.44
VPS41-204ENST00000413141 OR5M10Q6IEU7 315 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 SLC30A6Q6NXT4 461 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 TTC33Q6PID6 262 aaPredicted RBP6.05□□□□□ -1.44
VPS41-204ENST00000413141 ZNF620Q6ZNG0 422 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 Q6ZPB1 254 aaPredicted RBP6.05□□□□□ -1.44
VPS41-204ENST00000413141 RTL4Q6ZR62 310 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 RRM2BQ7LG56 351 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 GRINAQ7Z429 371 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 KIF18BQ86Y91 864 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 CCDC71Q8IV32 467 aaPredicted RBP6.05□□□□□ -1.44
VPS41-204ENST00000413141 C8orf59Q8N0T1 100 aaPredicted RBP6.05□□□□□ -1.44
VPS41-204ENST00000413141 CYP4Z2PQ8N1L4 340 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 GALNT16Q8N428 558 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 SETD9Q8NE22 299 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 ELOA3Q8NG57 546 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 FANK1Q8TC84 345 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 GPR119Q8TDV5 335 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 FBLIM1Q8WUP2 373 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 THAP4Q8WY91 577 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 ST8SIA1Q92185 356 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 NTNG2Q96CW9 530 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 BPIFA2Q96DR5 249 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 HRASLS5Q96KN8 279 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 SGCZQ96LD1 299 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 APOL4Q9BPW4 351 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 TMEM43Q9BTV4 400 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 SCNM1Q9BWG6 230 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 ANGPTL4Q9BY76 406 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 DPH1Q9BZG8 443 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 PLA2G12AQ9BZM1 189 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 SLC19A3Q9BZV2 496 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 ADAM19Q9H013 955 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 DSN1Q9H410 356 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 HHATLQ9HCP6 504 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 MEPEQ9NQ76 525 aaPredicted RBP6.05□□□□□ -1.44
VPS41-204ENST00000413141 SDHAF3Q9NRP4 125 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 PNPLA3Q9NST1 481 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 ANKRD10Q9NXR5 420 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 TAS2R10Q9NYW0 307 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 ABI3Q9P2A4 366 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 TEKT2Q9UIF3 430 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 WASF3Q9UPY6 502 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 MED31Q9Y3C7 131 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 GMPPBQ9Y5P6 360 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 A0A0G2JMM0 328 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 A0A1W2PPB8 328 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 A0A1W2PRS3 328 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ANKRD33BA6NCL7 494 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 UNC119BA6NIH7 251 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ZNF891A8MT65 544 aaPredicted RBP6.04□□□□□ -1.44
VPS41-204ENST00000413141 KIR3DP1A8MWS1 328 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 H3BN98 237 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ETV2O00321 342 aaPredicted RBP6.04□□□□□ -1.44
VPS41-204ENST00000413141 NKX2-8O15522 239 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 TNFAIP8O95379 198 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 WISP1O95388 367 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 IGF2P01344 180 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 LYNP07948 512 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 IGFBP1P08833 259 aaPredicted RBP6.04□□□□□ -1.44
VPS41-204ENST00000413141 GP1BBP13224 206 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 PRKCAP17252 672 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 FUT1P19526 365 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 POU1F1P28069 291 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 CASRP41180 1078 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 HTR3AP46098 478 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 CYB561P49447 251 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ZNF41P51814 821 aaPredicted RBP6.04□□□□□ -1.44
VPS41-204ENST00000413141 POLR2HP52434 150 aaKnown RBP6.04□□□□□ -1.44
VPS41-204ENST00000413141 CHN2P52757 468 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ISL1P61371 349 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 IL5RAQ01344 420 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 CRYZQ08257 329 aaKnown RBP6.04□□□□□ -1.44
VPS41-204ENST00000413141 CD47Q08722 323 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 FOXF1Q12946 379 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 TUBA3CQ13748 450 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 PTGES3Q15185 160 aaKnown RBP6.04□□□□□ -1.44
VPS41-204ENST00000413141 INPP5JQ15735 1006 aaPredicted RBP6.04□□□□□ -1.44
VPS41-204ENST00000413141 CTU2Q2VPK5 515 aaKnown RBP6.04□□□□□ -1.44
VPS41-204ENST00000413141 PLPPR5Q32ZL2 321 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ABHD17BQ5VST6 288 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 SLX4IPQ5VYV7 408 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 SLC22A10Q63ZE4 541 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 TUBA3EQ6PEY2 450 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ARSKQ6UWY0 536 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ISLR2Q6UXK2 745 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 RASSF6Q6ZTQ3 369 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 TMPRSS11FQ6ZWK6 438 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 SLC46A3Q7Z3Q1 461 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 MDGA2Q7Z553 956 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 THAP5Q7Z6K1 395 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ZNF227Q86WZ6 799 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 P3H2Q8IVL5 708 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 CLDN22Q8N7P3 220 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 FADS6Q8N9I5 356 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 WDSUB1Q8N9V3 476 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 PSD4Q8NDX1 1056 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 OR2M3Q8NG83 312 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms