RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 STAP1Q9ULZ2 295 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 RNF24Q9Y225 148 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 PDE10AQ9Y233 779 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 METP08581 1390 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 CNTNAP2Q9UHC6 1331 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 FRMPD3Q5JV73 1810 aa3.81□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 H3BMQ9 156 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 BMPR1BO00238 502 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 INPP4BO15327 924 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 PSTPIP1O43586 416 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 KDELR3O43731 214 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 PAK4O96013 591 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 MMP1P03956 469 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 ANXA5P08758 320 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 HOXB7P09629 217 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF853P0CG23 659 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 MYL2P10916 166 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 CCNOP22674 350 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 RPL9P32969 192 aaKnown RBP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 QARSP47897 775 aaKnown RBP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 IST1P53990 364 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 DLX5P56178 289 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 KRTAP10-11P60412 298 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 KCNJ2P63252 427 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 RAB40BQ12829 278 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 CDH17Q12864 832 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF177Q13360 481 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 TAB1Q15750 504 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF77Q15935 545 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 AANATQ16613 207 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 MS4A18Q3C1V0 323 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 LY6G6FQ5SQ64 297 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 C1orf220Q5T0J3 134 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 GPR157Q5UAW9 335 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 OR8G2PQ6IF36 304 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 CCDC137Q6PK04 289 aaKnown RBP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 C6orf89Q6UWU4 347 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 MOB2Q70IA6 237 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 CHMP1BQ7LBR1 199 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 SMIM29Q86T20 159 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 STPG4Q8N801 248 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 ATP6V0D2Q8N8Y2 350 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 B3GNT7Q8NFL0 401 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 OR5T2Q8NGG2 359 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 OR52I1Q8NGK6 324 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 OR13C9Q8NGT0 318 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 SMAP2Q8WU79 429 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 ZNRF4Q8WWF5 429 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 DYRK2Q92630 601 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 C8orf44Q96CB5 159 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 NTNG2Q96CW9 530 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 TRNT1Q96Q11 434 aaKnown RBP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 ALKBH3Q96Q83 286 aaPredicted RBP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 TMEM175Q9BSA9 504 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 MCRIP2Q9BUT9 160 aaKnown RBP3.8□□□□□ -1.8
BRCA1-204ENST00000412061 MMP28Q9H239 520 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 GLIPR2Q9H4G4 154 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 ADGRL4Q9HBW9 690 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 IL26Q9NPH9 171 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 ESM1Q9NQ30 184 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 NRBP2Q9NSY0 501 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 GALPQ9UBC7 116 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 SEC14L4Q9UDX3 406 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 FLVCR2Q9UPI3 526 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 SCML2Q9UQR0 700 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 AK9Q5TCS8 1911 aa3.8□□□□□ -1.8
BRCA1-204ENST00000412061 A0A1B0GUS0 222 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 CCDC182A6NF36 153 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 CCT8L1PA6NM43 557 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 PDZK1P1A8MUH7 402 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 C11orf98E9PRG8 122 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 NR5A2O00482 541 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 FCN1O00602 326 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 TNFSF12O43508 249 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 SERPINE2P07093 398 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 PRSS1P07477 247 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 PRPS2P11908 318 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF43P17038 809 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 CALML3P27482 149 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 MMP12P39900 470 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 ARRB1P49407 418 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-204ENST00000412061 HSPA2P54652 639 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 RAB10P61026 200 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 IRX3P78415 501 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-204ENST00000412061 GUCY2DQ02846 1103 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 ZNF85Q03923 595 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 RAD51Q06609 339 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 RIPPLY1Q0D2K3 151 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 LAGE3Q14657 143 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 C9orf135Q5VTT2 229 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 C22orf42Q6IC83 251 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 FAHD2BQ6P2I3 314 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-204ENST00000412061 RBMS3Q6XE24 437 aaKnown RBP3.79□□□□□ -1.8
BRCA1-204ENST00000412061 NDUFAF7Q7L592 441 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 SLC26A9Q7LBE3 791 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 SLC16A14Q7RTX9 510 aa3.79□□□□□ -1.8
BRCA1-204ENST00000412061 TRPT1Q86TN4 253 aaKnown RBP3.79□□□□□ -1.8
BRCA1-204ENST00000412061 CMTM8Q8IZV2 173 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms