RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 MYO18BQ8IUG5 2567 aa12.55□□□□□ -0.4
CPNE1-206ENST00000412056 WIPF3A6NGB9 483 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 CD8B2A6NJW9 211 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 B2RBV5 119 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 TOXO94900 526 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 LGI1O95970 557 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 HTR2AP28223 471 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 TACR3P29371 465 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 KDELR2P33947 212 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 RGS8P57771 180 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-206ENST00000412056 SF3B4Q15427 424 aaKnown RBP eCLIP12.54□□□□□ -0.48e-8■■■■■ 28.6
CPNE1-206ENST00000412056 TMEM176BQ3YBM2 270 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-206ENST00000412056 C3orf33Q6P1S2 294 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 C16orf89Q6UX73 402 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 RINLQ6ZS11 566 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 ADGRG3Q86Y34 549 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 LACC1Q8IV20 430 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 DEFB107AQ8IZN7 70 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 RNF148Q8N7C7 305 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 C9orf106Q8NAJ2 232 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 RBM15BQ8NDT2 890 aaKnown RBP12.54□□□□□ -0.4
CPNE1-206ENST00000412056 OR10D3Q8NH80 312 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 ITLN2Q8WWU7 325 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-206ENST00000412056 FIG4Q92562 907 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 RND1Q92730 232 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 ARHGDIGQ99819 225 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 PRR14Q9BWN1 585 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 COQ10BQ9H8M1 238 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 STOML1Q9UBI4 398 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 OSGIN1Q9UJX0 560 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 SLC13A4Q9UKG4 626 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 UBR5O95071 2799 aaPredicted RBP12.54□□□□□ -0.4
CPNE1-206ENST00000412056 HCFC1P51610 2035 aa12.54□□□□□ -0.4
CPNE1-206ENST00000412056 ICE1Q9Y2F5 2266 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 TMED7-TICAM2A0A0A6YYA0 188 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 A0A1W2PNR3 127 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 TMEM72A0PK05 275 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 MBD3L4A6NDZ8 208 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 MBD3L3A6NE82 208 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 MBD3L5A6NJ08 208 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 TMEM229AB2RXF0 380 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 SYT5O00445 386 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CXCR6O00574 342 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 GSTA4O15217 222 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CXCL13O43927 109 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 UBOX5O94941 541 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 NCK1P16333 377 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CCNA2P20248 432 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CALB2P22676 271 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CPOXP36551 454 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 APOBEC1P41238 236 aaKnown RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 SLC1A3P43003 542 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 MNAT1P51948 309 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 POLR2HP52434 150 aaKnown RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 RPS3AP61247 264 aaKnown RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 COPZ1P61923 177 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CDSNQ15517 529 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 RIPPLY2Q5TAB7 128 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 HBMQ6B0K9 141 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 WBP2NLQ6ICG8 309 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 ESPNLQ6ZVH7 1005 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CHMP1BQ7LBR1 199 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 MRGPRGQ86SM5 289 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CCDC71Q8IV32 467 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 NAXEQ8NCW5 288 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 TNIP2Q8NFZ5 429 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 OR4D11Q8NGI4 311 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 OR10Q1Q8NGQ4 319 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 OR2V1Q8NHB1 315 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 MBD3L2Q8NHZ7 208 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 VANGL1Q8TAA9 524 aaPredicted RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 C3orf49Q96BT1 292 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 SDCCAG3Q96C92 435 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 DNAJA3Q96EY1 480 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CDRT15Q96T59 188 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 ADAM19Q9H013 955 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CALHM2Q9HA72 323 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 SERINC1Q9NRX5 453 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 NDE1Q9NXR1 346 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 KLHL28Q9NXS3 571 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 CHRNA9Q9UGM1 479 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 RNF6Q9Y252 685 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 TMED7Q9Y3B3 224 aa12.53□□□□□ -0.4
CPNE1-206ENST00000412056 SPTBN1Q01082 2364 aaKnown RBP12.53□□□□□ -0.4
CPNE1-206ENST00000412056 A0A0G2JNJ9 132 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 GJE1A6NN92 205 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 ADAMDEC1O15204 470 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 TPST2O60704 377 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 TGM6O95932 706 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 IFNA14P01570 189 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 FESP07332 822 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 C8BP07358 591 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 TFPIP10646 304 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 GGT1P19440 569 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 TCN1P20061 433 aaPredicted RBP12.52□□□□□ -0.41
CPNE1-206ENST00000412056 TNFRSF1BP20333 461 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 HTR1EP28566 365 aa12.52□□□□□ -0.41
CPNE1-206ENST00000412056 TIMP3P35625 211 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms