RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 IDH2P48735 452 aaKnown RBP16.97■□□□□ 0.31
SF3A1-202ENST00000411423 RAC3P60763 192 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 DSTNP60981 165 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 TXNL4AP83876 142 aaKnown RBP16.97■□□□□ 0.31
SF3A1-202ENST00000411423 MRPL2Q5T653 305 aaKnown RBP16.97■□□□□ 0.31
SF3A1-202ENST00000411423 BLOC1S3Q6QNY0 202 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 STAC2Q6ZMT1 411 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 ADGRG3Q86Y34 549 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 ARFGAP2Q8N6H7 521 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 SLC38A5Q8WUX1 472 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 WDR60Q8WVS4 1066 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 ARL5BQ96KC2 179 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 MAGEB18Q96M61 343 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 PSD2Q9BQI7 771 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 KLHL4Q9C0H6 718 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 MTHFD2LQ9H903 347 aaPredicted RBP16.97■□□□□ 0.31
SF3A1-202ENST00000411423 GLRX2Q9NS18 164 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 ARGLU1Q9NWB6 273 aaPredicted RBP16.97■□□□□ 0.31
SF3A1-202ENST00000411423 ZNF446Q9NWS9 450 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 CCDC167Q9P0B6 97 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 KLHL13Q9P2N7 655 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 P2RX2Q9UBL9 471 aa16.97■□□□□ 0.31
SF3A1-202ENST00000411423 AKAP6Q13023 2319 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 HIVEP1P15822 2718 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 NR5A2O00482 541 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 SLC7A1P30825 629 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 ART1P52961 327 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 RGNQ15493 299 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 SYT14P1Q58G82 188 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 TFAP2EQ6VUC0 442 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 ZNF836Q6ZNA1 936 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 ZNF563Q8TA94 476 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 TMEM234Q8WY98 164 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 MAL2Q969L2 176 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 ZC3HAV1LQ96H79 300 aaKnown RBP16.96■□□□□ 0.31
SF3A1-202ENST00000411423 TMEM19Q96HH6 336 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 HS3ST6Q96QI5 342 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 ZNF300Q96RE9 604 aaPredicted RBP16.96■□□□□ 0.31
SF3A1-202ENST00000411423 SLC39A3Q9BRY0 314 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 OR11A1Q9GZK7 315 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 NDRG3Q9UGV2 375 aa16.96■□□□□ 0.31
SF3A1-202ENST00000411423 ZNF469Q96JG9 3925 aaPredicted RBP16.96■□□□□ 0.31
SF3A1-202ENST00000411423 VPS13CQ709C8 3753 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 ZNF814B7Z6K7 855 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 CLIC1O00299 241 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 DBIP07108 87 aaKnown RBP16.95■□□□□ 0.3
SF3A1-202ENST00000411423 FESP07332 822 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 GKN3PP0CG01 181 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 CCNA2P20248 432 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 CRYGSP22914 178 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 DIO1P49895 249 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 ANXA11P50995 505 aaKnown RBP16.95■□□□□ 0.3
SF3A1-202ENST00000411423 STX1BP61266 288 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 EPS8Q12929 822 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 TSC22D1Q15714 1073 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 LRIF1Q5T3J3 769 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 FBXW10Q5XX13 1052 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 PAMR1Q6UXH9 720 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 TMPPEQ6ZT21 453 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.95■□□□□ 0.3
SF3A1-202ENST00000411423 GRINAQ7Z429 371 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 CMIPQ8IY22 773 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 CLIP4Q8N3C7 705 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 GOLGA6L1Q8N7Z2 621 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 OR52P1PQ8NH57 321 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 ZNF775Q96BV0 537 aaPredicted RBP16.95■□□□□ 0.3
SF3A1-202ENST00000411423 SPDL1Q96EA4 605 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 MED18Q9BUE0 208 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 IKZF5Q9H5V7 419 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 ZNF385DQ9H6B1 395 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 TIGARQ9NQ88 270 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 VAPAQ9P0L0 249 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 CHRNA9Q9UGM1 479 aa16.95■□□□□ 0.3
SF3A1-202ENST00000411423 A0A096LPI6 279 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 TRBV5-3A0A0A0MS03 114 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 TMEM72A0PK05 275 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 CDHR4A6H8M9 788 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 CYTIPO60759 359 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 EDF1O60869 148 aaKnown RBP16.94■□□□□ 0.3
SF3A1-202ENST00000411423 RAMP1O60894 148 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 GCM2O75603 506 aaPredicted RBP16.94■□□□□ 0.3
SF3A1-202ENST00000411423 PRKD3O94806 890 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 ATE1O95260 518 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 PRG2P13727 222 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 IL7RP16871 459 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 APOBEC1P41238 236 aaKnown RBP16.94■□□□□ 0.3
SF3A1-202ENST00000411423 ACAA2P42765 397 aaKnown RBP16.94■□□□□ 0.3
SF3A1-202ENST00000411423 MAGEA8P43361 318 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 RNPS1Q15287 305 aaKnown RBP16.94■□□□□ 0.3
SF3A1-202ENST00000411423 AGKQ53H12 422 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 SPNS3Q6ZMD2 512 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 GABRG1Q8N1C3 465 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 NINJ1Q92982 152 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 BCO1Q9HAY6 547 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 SERINC1Q9NRX5 453 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 OSGIN1Q9UJX0 560 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 ZNF443Q9Y2A4 671 aaPredicted RBP16.94■□□□□ 0.3
SF3A1-202ENST00000411423 ABCA4P78363 2273 aa16.94■□□□□ 0.3
SF3A1-202ENST00000411423 TMED7-TICAM2A0A0A6YYA0 188 aa16.93■□□□□ 0.3
SF3A1-202ENST00000411423 ZC3H12DA2A288 527 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms