RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 ERVK-8P63133 956 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ERVK-25P63136 954 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CSNK2A1P68400 391 aaPredicted RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 MALLQ13021 153 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 IKQ13123 557 aaPredicted RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 KLRD1Q13241 179 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 DNASE1L3Q13609 305 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 GALEQ14376 348 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 KIAA0087Q14695 138 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLMAPQ14BN4 828 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ACOX1Q15067 660 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 TAF13Q15543 124 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZBTB6Q15916 424 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CTF1Q16619 201 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZSWIM7Q19AV6 140 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 LRIT3Q3SXY7 679 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZBED5Q49AG3 693 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC39A12Q504Y0 691 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CMPK2Q5EBM0 449 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PPP6R3Q5H9R7 873 aaPredicted RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 KHDC1LQ5JSQ8 128 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 LIPJQ5W064 366 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PLBD1Q6P4A8 553 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 GJB7Q6PEY0 223 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 STAC2Q6ZMT1 411 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 NLRP9Q7RTR0 991 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 FAM19A5Q7Z5A7 132 aaPredicted RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 R3HCC1LQ7Z5L2 792 aaKnown RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLFN11Q7Z7L1 901 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 LINC00596Q86U02 117 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC26A11Q86WA9 606 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CCDC25Q86WR0 208 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 LRRC28Q86X40 367 aaPredicted RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 BOD1L2Q8IYS8 172 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SCYL3Q8IZE3 742 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 KIRREL3Q8IZU9 778 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMTC2Q8N394 836 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 TEX9Q8N6V9 391 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC35G3Q8N808 338 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 C12orf29Q8N999 325 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF610Q8N9Z0 462 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC4A11Q8NBS3 891 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CSNK2A3Q8NEV1 391 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR5C1Q8NGR4 320 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR4C6Q8NH72 309 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR1L3Q8NH93 324 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ASB12Q8WXK4 309 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 RAB24Q969Q5 203 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PPP2R3CQ969Q6 453 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 MUL1Q969V5 352 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PNPLA2Q96AD5 504 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 RBM18Q96H35 190 aaKnown RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 RAX2Q96IS3 184 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 NSL1Q96IY1 281 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 EPSTI1Q96J88 318 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 VPS39Q96JC1 886 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 MRGPRX1Q96LB2 322 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ADAD1Q96M93 576 aaKnown RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PARK7Q99497 189 aaKnown RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 MTERF1Q99551 399 aaKnown RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 POLR3GLQ9BT43 218 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 TBCDQ9BTW9 1192 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 MECRQ9BV79 373 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ERVK-6Q9BXR3 956 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC26A6Q9BXS9 759 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 LRRC2Q9BYS8 371 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 LHPPQ9H008 270 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 WWP1Q9H0M0 922 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CARD9Q9H257 536 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 RDH14Q9HBH5 336 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 TRPC7Q9HCX4 862 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC40A1Q9NP59 571 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SAYSD1Q9NPB0 183 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 ITM2CQ9NQX7 267 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 HELLSQ9NRZ9 838 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 IMPAD1Q9NX62 359 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 MTMR10Q9NXD2 777 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SNTG2Q9NY99 539 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR6C2Q9NZP2 312 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CD274Q9NZQ7 290 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 MYO1AQ9UBC5 1043 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 TRPC4Q9UBN4 977 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SWAP70Q9UH65 585 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 SERPINB13Q9UIV8 391 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 GMEB2Q9UKD1 530 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 RNF150Q9ULK6 438 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PADI3Q9ULW8 664 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 VPS4AQ9UN37 437 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CORO2BQ9UQ03 480 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PPP2R2CQ9Y2T4 447 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 DERAQ9Y315 318 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CBY1Q9Y3M2 126 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 PHLDB1Q86UU1 1377 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 C10orf71Q711Q0 1435 aa-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 GOLGA4Q13439 2230 aaKnown RBP-2.02□□□□□ -2.73
RNU4-88P-201ENST00000411220 CDC42BPAQ5VT25 1732 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 IGHV5-10-1A0A0J9YXX1 117 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 A0A1B0GVX0 72 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 M0R2N4 97 aa-2.03□□□□□ -2.73
RNU4-88P-201ENST00000411220 DNALI1O14645 258 aaPredicted RBP-2.03□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms