RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 SGCDQ92629 289 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 UBE2FQ969M7 185 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 NTNG2Q96CW9 530 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 AIFM2Q9BRQ8 373 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 PLA2G12AQ9BZM1 189 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SLC19A3Q9BZV2 496 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 DSN1Q9H410 356 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 C20orf141Q9NUB4 165 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 FAM86C1Q9NVL1 165 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SULT1B1O43704 296 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 ATP6V1B1P15313 513 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 JUNBP17275 347 aaPredicted RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 MAKP20794 623 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 GPR4P46093 362 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 GIPRP48546 466 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 FXYD6P3P58550 94 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 NTRK2Q16620 822 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM236Q5W0B7 351 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM81Q6P7N7 255 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 C16orf47Q6ZP98 133 aaPredicted RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 NDUFAF7Q7L592 441 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 RRM2BQ7LG56 351 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 NUP54Q7Z3B4 507 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 GATSQ8NAP1 163 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 DEFB124Q8NES8 71 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 BRIX1Q8TDN6 353 aaKnown RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 GRHL3Q8TE85 626 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 ARSGQ96EG1 525 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 CEP19Q96LK0 163 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 POLDIP3Q9BY77 421 aaKnown RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 ADAM19Q9H013 955 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 RBM38Q9H0Z9 239 aaKnown RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 EGLN3Q9H6Z9 239 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 LIN28AQ9H9Z2 209 aaKnown RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 AASSQ9UDR5 926 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 MED31Q9Y3C7 131 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 PCDHGB1Q9Y5G3 927 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 CDH10Q9Y6N8 788 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 GPR179Q6PRD1 2367 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 IGLV3-32A0A0A0MS00 114 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SH3D21A4FU49 640 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 UNC119BA6NIH7 251 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 C21orf140B9A014 251 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 H3BN98 237 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 FTH1P19P0C7X4 201 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SFTPCP11686 197 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 CSRP1P21291 193 aaKnown RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 FMO3P31513 532 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TMED10P49755 219 aaKnown RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SMSP52788 366 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 CHAF1BQ13112 559 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 FHL1Q13642 323 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SSPNQ14714 243 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SMN1Q16637 294 aaKnown RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 NADK2Q4G0N4 442 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 C3orf38Q5JPI3 329 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM164Q5U3C3 297 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 RPL13AP3Q6NVV1 102 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 BORAQ6PGQ7 559 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 MARCH3Q86UD3 253 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SLC43A2Q8N370 569 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 OR5W2Q8NH69 310 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TEX47Q8TBZ9 253 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 SLC22A8Q8TCC7 542 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 IPCEF1Q8WWN9 437 aaPredicted RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 OSTF1Q92882 214 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 ZNF524Q96C55 264 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 BPIFA2Q96DR5 249 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 NODALQ96S42 347 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 KLHDC3Q9BQ90 382 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TMEM43Q9BTV4 400 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 GPR87Q9BY21 358 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TBL1XR1Q9BZK7 514 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 ADNPQ9H2P0 1102 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TIMMDC1Q9NPL8 285 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 RPS6KB2Q9UBS0 482 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 FARSAQ9Y285 508 aaKnown RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TMA7Q9Y2S6 64 aaKnown RBP5.04□□□□□ -1.6
EPHA4-202ENST00000409854 TPRKBQ9Y3C4 175 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 KIAA1549Q9HCM3 1950 aa5.04□□□□□ -1.6
EPHA4-202ENST00000409854 IGKV1D-42A0A075B6H8 117 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SMIM31A0A1B0GVY4 71 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 CCDC160A6NGH7 325 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 GTPBP1O00178 669 aaKnown RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 WWP2O00308 870 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 TM4SF5O14894 197 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 XPNPEP2O43895 674 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 HPP00738 406 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PNMTP11086 282 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 IFI30P13284 250 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 TCN2P20062 427 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PCMT1P22061 227 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 PTGDSP41222 190 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SLC1A3P43003 542 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SLC15A1P46059 708 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 IDH2P48735 452 aaKnown RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 P2RX1P51575 399 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 SUMO3P55854 103 aaPredicted RBP5.03□□□□□ -1.6
EPHA4-202ENST00000409854 FBXW4P57775 412 aa5.03□□□□□ -1.6
EPHA4-202ENST00000409854 COPZ1P61923 177 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms