RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PRKAR1AP10644 381 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 LIPCP11150 499 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 PTGDSP41222 190 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 SLC1A3P43003 542 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 GAS1P54826 345 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 PRKCDQ05655 676 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 CDK5R2Q13319 367 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 GINS1Q14691 196 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 MAD2L1BPQ15013 274 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-204ENST00000409727 SMN1Q16637 294 aaKnown RBP11.34□□□□□ -0.59
CHMP3-204ENST00000409727 DCAF10Q5QP82 559 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 SWT1Q5T5J6 900 aaKnown RBP11.34□□□□□ -0.59
CHMP3-204ENST00000409727 LAIR2Q6ISS4 152 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 CD300LDQ6UXZ3 194 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 LINC00114Q6XXX2 140 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 ATG4DQ86TL0 474 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-204ENST00000409727 MISPQ8IVT2 679 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 BPIFB6Q8NFQ5 453 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 TEX47Q8TBZ9 253 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 GPR119Q8TDV5 335 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 ZNF426Q9BUY5 554 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 ZNF696Q9H7X3 374 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 TBC1D23Q9NUY8 699 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 VDAC3Q9Y277 283 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 WIF1Q9Y5W5 379 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 TRAV27A0A087WT01 109 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 EFCAB9A8MZ26 197 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 CCL3P10147 92 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 PNMTP11086 282 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 GP1BBP13224 206 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 EEF1B2P24534 225 aaKnown RBP11.34□□□□□ -0.59
CHMP3-204ENST00000409727 RBM34P42696 430 aaKnown RBP11.34□□□□□ -0.59
CHMP3-204ENST00000409727 NUP107P57740 925 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 CDC42P60953 191 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 CHAF1BQ13112 559 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 BLMHQ13867 455 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 ACER2Q5QJU3 275 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 C6orf141Q5SZD1 244 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 ARSKQ6UWY0 536 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 RASSF6Q6ZTQ3 369 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 BEST3Q8N1M1 668 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 C10orf53Q8N6V4 93 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 TSPAN14Q8NG11 270 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 OR8D4Q8NGM9 314 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 OR51A7Q8NH64 312 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 FANK1Q8TC84 345 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 JSRP1Q96MG2 331 aaPredicted RBP11.34□□□□□ -0.59
CHMP3-204ENST00000409727 IL4I1Q96RQ9 567 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 TVP23BQ9NYZ1 205 aa11.34□□□□□ -0.59
CHMP3-204ENST00000409727 CELSR3Q9NYQ7 3312 aa11.33□□□□□ -0.59
CHMP3-204ENST00000409727 IGKV1D-42A0A075B6H8 117 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 XPNPEP2O43895 674 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 SMIM18P0DKX4 95 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 SPINK2P20155 84 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 RPS6KA3P51812 740 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 MLLT10P55197 1068 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 CAMK2BQ13554 666 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 SLC30A6Q6NXT4 461 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 ZNF620Q6ZNG0 422 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 PTCHD4Q6ZW05 846 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 MDGA2Q7Z553 956 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 LRRC17Q8N6Y2 441 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 APH1BQ8WW43 257 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 SGCDQ92629 289 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 SAMD8Q96LT4 415 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 NPAS1Q99742 590 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 TSSK6Q9BXA6 273 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 SDHAF3Q9NRP4 125 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 ZNF226Q9NYT6 803 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 TAS2R10Q9NYW0 307 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 OSGIN1Q9UJX0 560 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 TMEM5Q9Y2B1 443 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 HSPE1-MOB4S4R3N1 261 aa11.33□□□□□ -0.6
CHMP3-204ENST00000409727 PCNX3Q9H6A9 2034 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 TRABD2BA6NFA1 517 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 ANKUB1A6NFN9 424 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 A6NL46 340 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 SHISA8B8ZZ34 492 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 PTGES3LE9PB15 166 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 WBP4O75554 376 aaKnown RBP11.32□□□□□ -0.6
CHMP3-204ENST00000409727 CH25HO95992 272 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 CXCR1P25024 350 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 CTBP2P56545 445 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 OC90Q02509 493 aaPredicted RBP11.32□□□□□ -0.6
CHMP3-204ENST00000409727 PIGFQ07326 219 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 FOXC1Q12948 553 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 GXYLT1Q4G148 440 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 SLX4IPQ5VYV7 408 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 ACSM5Q6NUN0 579 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 SLC27A4Q6P1M0 643 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 CASP12Q6UXS9 341 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 TMPRSS11FQ6ZWK6 438 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 OAFQ86UD1 273 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 CCDC103Q8IW40 242 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 DEPDC4Q8N2C3 294 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 CLEC1AQ8NC01 280 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 FBLIM1Q8WUP2 373 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 RNF138Q8WVD3 245 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 PSMF1Q92530 271 aa11.32□□□□□ -0.6
CHMP3-204ENST00000409727 HDAC2Q92769 488 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms