RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 VSTM2BA6NLU5 285 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 NBR2O15453 112 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 PRKYO43930 277 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 FAM189A1O60320 539 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 B3GAT3O94766 335 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 PTBP3O95758 552 aaKnown RBP2.41□□□□□ -2.02
PMS1-203ENST00000409593 PCCBP05166 539 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 ATP6V1B2P21281 511 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 ADRA1AP35348 466 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 LONP1P36776 959 aaKnown RBP2.41□□□□□ -2.02
PMS1-203ENST00000409593 LEPP41159 167 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 PRKXP51817 358 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 ARL6IP1Q15041 203 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 LRRC31Q6UY01 552 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 ACOT7LQ6ZUV0 252 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 CATSPER4Q7RTX7 472 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 MRPL43Q8N983 215 aaKnown RBP2.41□□□□□ -2.02
PMS1-203ENST00000409593 OR56B4Q8NH76 319 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 CHCHD10Q8WYQ3 142 aaPredicted RBP2.41□□□□□ -2.02
PMS1-203ENST00000409593 TMEM158Q8WZ71 300 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 FAM210BQ96KR6 192 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 NRIP2Q9BQI9 281 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 NINJ2Q9NZG7 142 aa2.41□□□□□ -2.02
PMS1-203ENST00000409593 C6orf203Q9P0P8 240 aaPredicted RBP2.41□□□□□ -2.02
PMS1-203ENST00000409593 ERVV-1B6SEH8 477 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 E7ESA3 106 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 PES1O00541 588 aaKnown RBP2.4□□□□□ -2.03
PMS1-203ENST00000409593 TNFSF13O75888 250 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 OR4F21O95013 312 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 STMN1P16949 149 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 MAGP20916 626 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 GMFBP60983 142 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 MADCAM1Q13477 382 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 EIF4EBP1Q13541 118 aaPredicted RBP2.4□□□□□ -2.03
PMS1-203ENST00000409593 PARP10Q53GL7 1025 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 CASC10Q5T4H9 136 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 C12orf60Q5U649 245 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 LRRC8BQ6P9F7 803 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 C6orf89Q6UWU4 347 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 UNC5DQ6UXZ4 953 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 HDDC3Q8N4P3 179 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 OR8H1Q8NGG4 311 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 OR5L2Q8NGL0 311 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 FANK1Q8TC84 345 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 ZNF721Q8TF20 911 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 TCTEX1D2Q8WW35 142 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 RPL3LQ92901 407 aaKnown RBP2.4□□□□□ -2.03
PMS1-203ENST00000409593 CCDC47Q96A33 483 aaKnown RBP2.4□□□□□ -2.03
PMS1-203ENST00000409593 SLC6A7Q99884 636 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 PELOQ9BRX2 385 aaKnown RBP2.4□□□□□ -2.03
PMS1-203ENST00000409593 STOX2Q9P2F5 926 aaPredicted RBP2.4□□□□□ -2.03
PMS1-203ENST00000409593 KIF25Q9UIL4 384 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 TP53TG5Q9Y2B4 290 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 MAD1L1Q9Y6D9 718 aa2.4□□□□□ -2.03
PMS1-203ENST00000409593 CARMIL1Q5VZK9 1371 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 PPIAL4CA0A0B4J2A2 164 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 IGHV2-70DA0A0C4DH43 119 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 MOSP00540 346 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 CA1P00915 261 aaPredicted RBP2.39□□□□□ -2.03
PMS1-203ENST00000409593 PPIAL4GP0DN37 164 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 ADRB3P13945 408 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 CYP2B6P20813 491 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 DNAJB1P25685 340 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 KLK7P49862 253 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 TAS2R19P59542 299 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 NUCB2P80303 420 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 EWSR1Q01844 656 aaKnown RBP eCLIP2.39□□□□□ -2.03
PMS1-203ENST00000409593 TGFBR3Q03167 851 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 SHHQ15465 462 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 NRF1Q16656 503 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 OR52W1Q6IF63 320 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 RFLNAQ6ZTI6 216 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 KIAA1328Q86T90 577 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 TPRA1Q86W33 373 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 SVOPLQ8N434 492 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 NKAPP1Q8N9T2 125 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 MYLPFQ96A32 169 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 HDHD3Q9BSH5 251 aaPredicted RBP2.39□□□□□ -2.03
PMS1-203ENST00000409593 FICDQ9BVA6 458 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 VCPKMTQ9H867 229 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 DBNDD1Q9H9R9 158 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 NECAP2Q9NVZ3 263 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 AIPL1Q9NZN9 384 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 ERVW-1Q9UQF0 538 aa2.39□□□□□ -2.03
PMS1-203ENST00000409593 IGHV3-64DA0A0J9YX35 117 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 KRT87PA6NCN2 255 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 DLGAP1O14490 977 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 LANCL1O43813 399 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 SEC22BO75396 215 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 MED6O75586 246 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 FOXH1O75593 365 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 MBD3O95983 291 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 PLEKP08567 350 aaPredicted RBP2.38□□□□□ -2.03
PMS1-203ENST00000409593 ARF4P18085 180 aaPredicted RBP2.38□□□□□ -2.03
PMS1-203ENST00000409593 PSMA2P25787 234 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 ANXA13P27216 316 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 ACTA1P68133 377 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 ISLR2Q6UXK2 745 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 COX15Q7KZN9 410 aa2.38□□□□□ -2.03
PMS1-203ENST00000409593 DENND6BQ8NEG7 585 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms