RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 GDF7Q7Z4P5 450 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 MEX3DQ86XN8 651 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 NKAIN4Q8IVV8 208 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 UBQLNLQ8IYU4 475 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 DUS3LQ96G46 650 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 SLC41A3Q96GZ6 507 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 OR2B2Q9GZK3 357 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 OR11A1Q9GZK7 315 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 ZDHHC11Q9H8X9 412 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 ACER3Q9NUN7 267 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 VNN3Q9NY84 501 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 STX18Q9P2W9 335 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 ZNF337Q9Y3M9 751 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 FAM32AQ9Y421 112 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 ZFYVE26Q68DK2 2539 aa12.75□□□□□ -0.37
CHRNA1-204ENST00000409323 TMED7-TICAM2A0A0A6YYA0 188 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 TRGV5A0A0B4J1U4 118 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 A0A0B4J2E0 115 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 A0A1B0GX12 115 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 TMEM72A0PK05 275 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 ZC3H12DA2A288 527 aaKnown RBP12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 KPNA4O00629 521 aaPredicted RBP12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 KRT36O76013 467 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 GPIP06744 558 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 SLC1A3P43003 542 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 SRYQ05066 204 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 LAPTM4AQ15012 233 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 PLXDC2Q6UX71 529 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 GRINAQ7Z429 371 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 ADGRG3Q86Y34 549 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 TMEM234Q8WY98 164 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 WBP1Q96G27 269 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 PRRC1Q96M27 445 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 FNDC11Q9BVV2 318 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 TRIM2Q9C040 744 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 MAGIXQ9H6Y5 334 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 CCM2LQ9NUG4 571 aaPredicted RBP12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 SPRR3Q9UBC9 169 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 RIMS3Q9UJD0 308 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 TMED7Q9Y3B3 224 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 U3KQV3 271 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 IGSF10Q6WRI0 2623 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 ZGRF1Q86YA3 2104 aa12.74□□□□□ -0.37
CHRNA1-204ENST00000409323 PRRC2CQ9Y520 2896 aaKnown RBP12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 A0A1B0GTH9 108 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 TRAPPC13A5PLN9 417 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 SEC14L5O43304 696 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 SUSD5O60279 629 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 PRSS23O95084 383 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 LYPD3O95274 346 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 CRYABP02511 175 aaKnown RBP12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 UMPSP11172 480 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 RRM2P31350 389 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 IST1P53990 364 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 INAQ16352 499 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 FGD3Q5JSP0 725 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 C1QL3Q5VWW1 255 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 AMIGO2Q86SJ2 522 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 ATG4DQ86TL0 474 aaPredicted RBP12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 GTPBP8Q8N3Z3 284 aaPredicted RBP12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 LSMEM1Q8N8F7 131 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 NEIL3Q8TAT5 605 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 TMEM255BQ8WV15 326 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 FAR1Q8WVX9 515 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 ST8SIA1Q92185 356 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 NR4A3Q92570 626 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 SLC35B4Q969S0 331 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 ZBTB8AQ96BR9 441 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 ADAM19Q9H013 955 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 MAN2C1Q9NTJ4 1040 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 NKX1-2Q9UD57 310 aaPredicted RBP12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 AP4S1Q9Y587 144 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 A0A087WZY1 265 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 A0A1W2PNR3 127 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 ELOA3DA6NLF2 546 aaPredicted RBP12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 NPIPA2E9PIF3 369 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 NPIPA3F8WFD2 350 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 H0Y3Z8 333 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 FAAHO00519 579 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 PIP5K1CO60331 668 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 CST1P01037 141 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 TFPIP10646 304 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 BMP7P18075 431 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 RHCEP18577 417 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 CBLP22681 906 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 CXCR1P25024 350 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 SLC7A1P30825 629 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 MAGEA2P43356 314 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 POLR2HP52434 150 aaKnown RBP12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 GFRA1P56159 465 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 CLDN20P56880 219 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 GTF3C1Q12789 2109 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 TMEM44Q2T9K0 475 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 ELOA3BQ3SY89 546 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 ZNF324BQ6AW86 544 aaPredicted RBP12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 TBPL2Q6SJ96 375 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 CYP4Z1Q86W10 505 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 LILRA2Q8N149 483 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 ELOA3Q8NG57 546 aa12.73□□□□□ -0.37
CHRNA1-204ENST00000409323 CPT1CQ8TCG5 803 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms