RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 HOXB2P14652 356 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 HK1P19367 917 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 PVALBP20472 110 aaPredicted RBP12.03□□□□□ -0.48
PTPRN-202ENST00000409251 LIMK1P53667 647 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 SMIM11AP58511 58 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 C3orf38Q5JPI3 329 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 OTPQ5XKR4 325 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 SLC16A13Q7RTY0 426 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 OR10K1Q8NGX5 313 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 KIAA1143Q96AT1 154 aaPredicted RBP12.03□□□□□ -0.48
PTPRN-202ENST00000409251 NOX3Q9HBY0 568 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 HINT3Q9NQE9 182 aaKnown RBP12.03□□□□□ -0.48
PTPRN-202ENST00000409251 TAAR2Q9P1P5 351 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 FKBP7Q9Y680 259 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 NCOR1O75376 2440 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 UBE2QL1A1L167 161 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 PEX14O75381 377 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 LGI1O95970 557 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 HOXB3P14651 431 aaPredicted RBP12.03□□□□□ -0.48
PTPRN-202ENST00000409251 BMP7P18075 431 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 SSR2P43308 183 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 RPE65Q16518 533 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 ZDHHC20Q5W0Z9 365 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 HEPHL1Q6MZM0 1159 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 TMEM107Q6UX40 140 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 THAP4Q8WY91 577 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 ZCCHC2Q9C0B9 1178 aaKnown RBP12.03□□□□□ -0.48
PTPRN-202ENST00000409251 TAS2R10Q9NYW0 307 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 OBSL1O75147 1896 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 ABCA7Q8IZY2 2146 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 AGAP14A8MT82 685 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 ZNF705EA8MWA4 302 aaPredicted RBP12.02□□□□□ -0.48
PTPRN-202ENST00000409251 GPR31O00270 319 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 KHNYNO15037 678 aaKnown RBP12.02□□□□□ -0.48
PTPRN-202ENST00000409251 KCNAB3O43448 404 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 UBXN7O94888 489 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 RASGRP1O95267 797 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 SLC6A12P48065 614 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 TAS2R38P59533 333 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 ZP1P60852 638 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 PRPF38BQ5VTL8 546 aaKnown RBP12.02□□□□□ -0.48
PTPRN-202ENST00000409251 SHEQ5VZ18 495 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 PYHIN1Q6K0P9 492 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 LIN54Q6MZP7 749 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 FAM26EQ8N5C1 309 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 OR52I2Q8NH67 350 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 PIGXQ8TBF5 258 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 GRHL3Q8TE85 626 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 SCMH1Q96GD3 660 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 ZNF354BQ96LW1 612 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 NPAS1Q99742 590 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 CRB3Q9BUF7 120 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 BHLHE41Q9C0J9 482 aaPredicted RBP12.02□□□□□ -0.48
PTPRN-202ENST00000409251 TRIM36Q9NQ86 728 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 ZSCAN32Q9NX65 697 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 MED11Q9P086 117 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 KCMF1Q9P0J7 381 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 POMT2Q9UKY4 750 aa12.02□□□□□ -0.48
PTPRN-202ENST00000409251 TRBV23-1A0A0A0MS06 115 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 NPIPA5A0A0B4J1W7 369 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 RAB19A4D1S5 217 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 NPIPA7E9PJI5 369 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 RAD1O60671 282 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 FARS2O95363 451 aaKnown RBP12.02□□□□□ -0.49
PTPRN-202ENST00000409251 NPIPA8P0DM63 369 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 DCTDP32321 178 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 AP1S2P56377 157 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 PPP2CBP62714 309 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 PPP2CAP67775 309 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 NDUFAF6Q330K2 333 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 C12orf73Q69YU5 71 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 HBMQ6B0K9 141 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 ZNF770Q6IQ21 691 aaPredicted RBP12.02□□□□□ -0.49
PTPRN-202ENST00000409251 OR6K6Q8NGW6 343 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 WFIKKN2Q8TEU8 576 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 SEC22AQ96IW7 307 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 FCRL1Q96LA6 429 aa12.02□□□□□ -0.49
PTPRN-202ENST00000409251 SGK494L7N484 410 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 OR1F1O43749 312 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 SOX30O94993 753 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 C1orf105O95561 183 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 GKN3PP0CG01 181 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 CBSLP0DN79 551 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 ZP3P21754 424 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 CBSP35520 551 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 KCNC3Q14003 757 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 TMEM255AQ5JRV8 349 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 PLEKHS1Q5SXH7 462 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 TMEM255BQ8WV15 326 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 GHSRQ92847 366 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 DVL3Q92997 716 aaPredicted RBP12.01□□□□□ -0.49
PTPRN-202ENST00000409251 ZMYND19Q96E35 227 aaPredicted RBP12.01□□□□□ -0.49
PTPRN-202ENST00000409251 OR14A2Q96R54 314 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 MFFQ9GZY8 342 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 CHST8Q9H2A9 424 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 SLC6A15Q9H2J7 730 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 EVA1AQ9H8M9 152 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 FKRPQ9H9S5 495 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 PHF11Q9UIL8 331 aa12.01□□□□□ -0.49
PTPRN-202ENST00000409251 CDV3Q9UKY7 258 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms