RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 APBB3O95704 486 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 PTHP01270 115 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 PDGFAP04085 211 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 DEFA4P12838 97 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 TACR3P29371 465 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 FKBP1AP62942 108 aaKnown RBP13.06□□□□□ -0.32
AFF3-202ENST00000409236 TMEM107Q6UX40 140 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 OR4N4Q8N0Y3 316 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 GLOD5A6NK44 160 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 TMEM200CA6NKL6 621 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 TAAR5O14804 337 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 CLEC9AQ6UXN8 241 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 TIPARPQ7Z3E1 657 aaKnown RBP13.06□□□□□ -0.32
AFF3-202ENST00000409236 NETO2Q8NC67 525 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 SAT2Q96F10 170 aaPredicted RBP13.06□□□□□ -0.32
AFF3-202ENST00000409236 TRIB1Q96RU8 372 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 LMF2Q9BU23 707 aaKnown RBP13.06□□□□□ -0.32
AFF3-202ENST00000409236 LOC730098B7Z3J9 87 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 SORDQ00796 357 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 HYAL2Q12891 473 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 RAB8BQ92930 207 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 TDRD6O60522 2096 aaKnown RBP13.06□□□□□ -0.32
AFF3-202ENST00000409236 DOCK8Q8NF50 2099 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 C8orf89P0DMQ9 161 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 ZNF718Q3SXZ3 478 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 PKMYT1Q99640 499 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 HCAR1Q9BXC0 346 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 RBFOX1Q9NWB1 397 aaKnown RBP13.06□□□□□ -0.32
AFF3-202ENST00000409236 OR1A2Q9Y585 309 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 ATRNO75882 1429 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 ALPIP09923 528 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 C6orf136Q5SQH8 315 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 PGBD5Q8N414 524 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
AFF3-202ENST00000409236 SLC25A32Q9H2D1 315 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 POFUT1Q9H488 388 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 MRPL22Q9NWU5 206 aaKnown RBP13.06□□□□□ -0.32
AFF3-202ENST00000409236 MTCH1Q9NZJ7 389 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 AKAP11Q9UKA4 1901 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 ITGB8P26012 769 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 FEVQ99581 238 aa13.06□□□□□ -0.32
AFF3-202ENST00000409236 PRR36Q9H6K5 1346 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 GPR37L1O60883 481 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 JTBO76095 146 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 LYPLA2O95372 231 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 CD52P31358 61 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 GDF10P55107 478 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 STEAP1BQ6NZ63 245 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 TSTD1Q8NFU3 115 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 PCDHAC2Q9Y5I4 1007 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 TRAV20A0A0B4J274 112 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 SMIM17P0DL12 118 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 OMGP23515 440 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 C15orf52Q6ZUT6 534 aaKnown RBP13.05□□□□□ -0.32
AFF3-202ENST00000409236 ZFP92A6NM28 416 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 TRAPPC2LH3BP13 241 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 PMS2P2O95744 297 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 PTNP21246 168 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 SLC7A9P82251 487 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 PPP1R3AQ16821 1122 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 PRAMEF8Q5VWM4 474 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 PRAMEF7Q5VXH5 474 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 ASPGQ86U10 573 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 WDR5BQ86VZ2 330 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 ATG2BQ96BY7 2078 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 GABRA4P48169 554 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 SLC25A21Q9BQT8 299 aaPredicted RBP13.05□□□□□ -0.32
AFF3-202ENST00000409236 C20orf85Q9H1P6 137 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 NSUN3Q9H649 340 aaKnown RBP13.05□□□□□ -0.32
AFF3-202ENST00000409236 DOCK10Q96BY6 2186 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 SERINC5Q86VE9 423 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 KCNA7Q96RP8 456 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 KCNG2Q9UJ96 466 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 FAM221BA6H8Z2 402 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 ACSM1Q08AH1 577 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 MLLT11Q13015 90 aaPredicted RBP13.05□□□□□ -0.32
AFF3-202ENST00000409236 CDK5R2Q13319 367 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 TCTE1Q5JU00 501 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 FAM182BQ5T319 152 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 KLHDC8BQ8IXV7 354 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 ZNF561Q8N587 486 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 APH1BQ8WW43 257 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 GAS2L1Q99501 681 aaPredicted RBP13.05□□□□□ -0.32
AFF3-202ENST00000409236 TOLLIPQ9H0E2 274 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 MVB12BQ9H7P6 319 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 ZNF281Q9Y2X9 895 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 TCRBV5S4A2TA0A5A2 114 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 TGFBR3Q03167 851 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.05□□□□□ -0.32
AFF3-202ENST00000409236 SLC2A9Q9NRM0 540 aa13.05□□□□□ -0.32
AFF3-202ENST00000409236 NLE1Q9NVX2 485 aaPredicted RBP13.05□□□□□ -0.32
AFF3-202ENST00000409236 MAFBQ9Y5Q3 323 aaPredicted RBP13.05□□□□□ -0.32
AFF3-202ENST00000409236 FZD7O75084 574 aa13.04□□□□□ -0.32
AFF3-202ENST00000409236 NDUFB2O95178 105 aa13.04□□□□□ -0.32
AFF3-202ENST00000409236 CSKP41240 450 aa13.04□□□□□ -0.32
AFF3-202ENST00000409236 GLIS3Q8NEA6 775 aa13.04□□□□□ -0.32
AFF3-202ENST00000409236 RASD1Q9Y272 281 aa13.04□□□□□ -0.32
AFF3-202ENST00000409236 PCDHA9Q9Y5H5 950 aa13.04□□□□□ -0.32
AFF3-202ENST00000409236 ZNF776Q68DI1 518 aaPredicted RBP13.04□□□□□ -0.32
AFF3-202ENST00000409236 HBMQ6B0K9 141 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms