RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 GABRG3Q99928 467 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 MEPEQ9NQ76 525 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 CNIH4Q9P003 139 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 CMAHPQ9Y471 501 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ANKRD34BA5PLL1 514 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SLC22A20A6NK97 555 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 PLOD2O00469 737 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 PRKRAO75569 313 aaKnown RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 CBX7O95931 251 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 CKMT1AP12532 417 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ST6GAL1P15907 406 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 IGFBP6P24592 240 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 PYCR1P32322 319 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SELENOWP63302 87 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 FZD2Q14332 565 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 MICAQ29983 383 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ZNF684Q5T5D7 378 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SLC48A1Q6P1K1 146 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 KCTD9Q7L273 389 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ZBTB46Q86UZ6 589 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 MKXQ8IYA7 352 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 CA13Q8N1Q1 262 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 B3GNT7Q8NFL0 401 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 FBXO27Q8NI29 283 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 PRR7Q8TB68 274 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 HAVCR2Q8TDQ0 301 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SLC25A43Q8WUT9 341 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 AKAP1Q92667 903 aaKnown RBP eCLIP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 TM4SF18Q96CE8 201 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SLC25A44Q96H78 314 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 LRR1Q96L50 414 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 C14orf119Q9NWQ9 140 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 B3GAT1Q9P2W7 334 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SEC14L4Q9UDX3 406 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 TRAV27A0A087WT01 109 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 A0A1B0GVC2 190 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 A0A1W2PPK0 400 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ORC5O43913 435 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 EIF4E2O60573 245 aaKnown RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 FCER2P06734 321 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 DBHP09172 617 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 NPR2P20594 1047 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 LHCGRP22888 699 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 APOBEC1P41238 236 aaKnown RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SLC19A1P41440 591 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 RPL19P84098 196 aaKnown RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 RHDQ02161 417 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ZMAT1Q5H9K5 638 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 C9orf152Q5JTZ5 239 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 TRIM46Q7Z4K8 759 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 KIF18BQ86Y91 864 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 KLBQ86Z14 1044 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 LILRA3Q8N6C8 439 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 OR4D9Q8NGE8 314 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 TMEM68Q96MH6 324 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 CPPED1Q9BRF8 314 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ARMC1Q9NVT9 282 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 LUZP4Q9P127 313 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 NUP50Q9UKX7 468 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 POMT2Q9UKY4 750 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SH2B3Q9UQQ2 575 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 MYH14Q7Z406 1995 aaKnown RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 C13orf42A0A1B0GVH6 325 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SLC5A10A0PJK1 596 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 BCKDHBP21953 392 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 HOXD12P35452 270 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 STT3AP46977 705 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 P2RX1P51575 399 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 EPHA5P54756 1037 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 TMPRSS3P57727 454 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 GNB2P62879 340 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 HOXC5Q00444 222 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 SSPNQ14714 243 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 PLEKHN1Q494U1 663 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 KHDC1LQ5JSQ8 128 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 DCDC5Q6ZRR9 648 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ASRGL1Q7L266 308 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 C11orf40Q8WZ69 217 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ZDHHC16Q969W1 377 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 LHPPQ9H008 270 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 NMNAT1Q9HAN9 279 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 TAS2R1Q9NYW7 299 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 COPZ2Q9P299 210 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 UBE2J1Q9Y385 318 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ST14Q9Y5Y6 855 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 OR14I1A6ND48 311 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ENSAO43768 121 aaKnown RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 APOL3O95236 402 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 OSMP13725 252 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 BIDP55957 195 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 PIN1Q13526 163 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 CDNFQ49AH0 187 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 KHDC1Q4VXA5 237 aaKnown RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 OGFOD2Q6N063 350 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 STX12Q86Y82 276 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 FBXL14Q8N1E6 418 aa4.66□□□□□ -1.66
SCN3A-203ENST00000409101 TP53I13Q8NBR0 393 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 APOBEC4Q8WW27 367 aaKnown RBP4.66□□□□□ -1.66
SCN3A-203ENST00000409101 ASB17Q8WXJ9 295 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms