RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 C3AR1Q16581 482 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 NDUFAF6Q330K2 333 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 CYBRD1Q53TN4 286 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 WIPI1Q5MNZ9 446 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-204ENST00000405578 WLSQ5T9L3 541 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 ARSKQ6UWY0 536 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 TGIF2LYQ8IUE0 185 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 PM20D2Q8IYS1 436 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 EID3Q8N140 333 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 CLIP4Q8N3C7 705 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 GTPBP8Q8N3Z3 284 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-204ENST00000405578 GPR119Q8TDV5 335 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 ABTB1Q969K4 478 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-204ENST00000405578 TAMM41Q96BW9 452 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 MRGPRX4Q96LA9 322 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 NSMCE2Q96MF7 247 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 REPIN1Q9BWE0 567 aaKnown RBP9.54□□□□□ -0.88
RPAIN-204ENST00000405578 TRIM15Q9C019 465 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 TRIM2Q9C040 744 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 SLC6A15Q9H2J7 730 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 MMADHCQ9H3L0 296 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-204ENST00000405578 GORASP2Q9H8Y8 452 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-204ENST00000405578 RPS6KB2Q9UBS0 482 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 CD300AQ9UGN4 299 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 EGFL7Q9UHF1 273 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 TINAGQ9UJW2 476 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 USP22Q9UPT9 525 aa9.54□□□□□ -0.88
RPAIN-204ENST00000405578 SAMD4AQ9UPU9 718 aaKnown RBP9.54□□□□□ -0.88
RPAIN-204ENST00000405578 SPIN1Q9Y657 262 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-204ENST00000405578 NSD1Q96L73 2696 aaPredicted RBP9.53□□□□□ -0.88
RPAIN-204ENST00000405578 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 A0A1B0GTH9 108 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 A0A1B0GVC2 190 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 FAM221AA4D161 298 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 GJE1A6NN92 205 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 AP3D1O14617 1153 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 OIP5O43482 229 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 ZIC3O60481 467 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 SLC19A2O60779 497 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 GCM2O75603 506 aaPredicted RBP9.53□□□□□ -0.88
RPAIN-204ENST00000405578 LGI1O95970 557 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 SERPINA1P01009 418 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 FESP07332 822 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 GKN3PP0CG01 181 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 NCK1P16333 377 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 KLK2P20151 261 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 TCEA1P23193 301 aaKnown RBP9.53□□□□□ -0.88
RPAIN-204ENST00000405578 FKBP2P26885 142 aaKnown RBP9.53□□□□□ -0.88
RPAIN-204ENST00000405578 ELK4P28324 431 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 APOBEC1P41238 236 aaKnown RBP9.53□□□□□ -0.88
RPAIN-204ENST00000405578 SLC1A3P43003 542 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 IDH2P48735 452 aaKnown RBP9.53□□□□□ -0.88
RPAIN-204ENST00000405578 SELENOWP63302 87 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 MERTKQ12866 999 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 EPS8Q12929 822 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 CEACAM7Q14002 265 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 TRIM25Q14258 630 aaKnown RBP9.53□□□□□ -0.88
RPAIN-204ENST00000405578 DUSP7Q16829 419 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 PLPPR5Q32ZL2 321 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 MTX3Q5HYI7 312 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 NHSL2Q5HYW2 709 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 WBP2NLQ6ICG8 309 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 NCCRP1Q6ZVX7 275 aaPredicted RBP9.53□□□□□ -0.88
RPAIN-204ENST00000405578 FKBP9P1Q75LS8 142 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 GRINAQ7Z429 371 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 MEIOBQ8N635 442 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 FAM156AQ8NDB6 213 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 OR52E4Q8NGH9 312 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 SLC7A6OSQ96CW6 309 aaPredicted RBP9.53□□□□□ -0.88
RPAIN-204ENST00000405578 TPD52L3Q96J77 140 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 LRGUKQ96M69 825 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 ZNF559Q9BR84 538 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 ENKD1Q9H0I2 346 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 TMEM27Q9HBJ8 222 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 PLSCR2Q9NRY7 297 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 ACER3Q9NUN7 267 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 ACTR3BQ9P1U1 418 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 TESQ9UGI8 421 aaKnown RBP9.53□□□□□ -0.88
RPAIN-204ENST00000405578 PACSIN3Q9UKS6 424 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 SH3GLB1Q9Y371 365 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 AP4B1Q9Y6B7 739 aa9.53□□□□□ -0.88
RPAIN-204ENST00000405578 OR2M5A3KFT3 312 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 FIGNL2A6NMB9 653 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 NPIPA2E9PIF3 369 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 NPIPA3F8WFD2 350 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 ARPC2O15144 300 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 GSC2O15499 205 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 TPST1O60507 370 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 FMO6PO60774 539 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 PDE5AO76074 875 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 TPOP07202 933 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 HOXD4P09016 255 aaPredicted RBP9.52□□□□□ -0.89
RPAIN-204ENST00000405578 PEPDP12955 493 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 PRKCAP17252 672 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 CD247P20963 164 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 POLR2HP52434 150 aaKnown RBP9.52□□□□□ -0.89
RPAIN-204ENST00000405578 MAP2K6P52564 334 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 GFRA1P56159 465 aa9.52□□□□□ -0.89
RPAIN-204ENST00000405578 SESN3P58005 492 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms