RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 PRRG3Q9BZD7 231 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 UCK1Q9HA47 277 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 MRPL40Q9NQ50 206 aaKnown RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZNF275Q9NSD4 429 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 DDX28Q9NUL7 540 aaKnown RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 SMOXQ9NWM0 555 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC2A8Q9NY64 477 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 MTCH1Q9NZJ7 389 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 PAK5Q9P286 719 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 TXNDC16Q9P2K2 825 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 P2RX2Q9UBL9 471 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 CD84Q9UIB8 345 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 RUVBL2Q9Y230 463 aaKnown RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 HEMK1Q9Y5R4 338 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 KLF2Q9Y5W3 355 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 HEATR5BQ9P2D3 2071 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 CELSR3Q9NYQ7 3312 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ITPR1Q14643 2758 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 FAM208BQ5VWN6 2430 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 TRBV5-4A0A0C4DH59 114 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 MROH6A6NGR9 719 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 A6NNC1 897 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 USP27XA6NNY8 438 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 NR5A2O00482 541 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 LSM1O15116 133 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 LDB2O43679 373 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 NUAK1O60285 661 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 ATP6AP2O75787 350 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 RGS11O94810 467 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC25A14O95258 325 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 ATP1A1P05023 1023 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 SFTPBP07988 381 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 CD8BP10966 210 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 CTSEP14091 401 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 TCP1P17987 556 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 FPR3P25089 353 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 CD80P33681 288 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 RPL22P35268 128 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 PTGER4P35408 488 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 SPAM1P38567 509 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 MAGEA6P43360 314 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC9A3P48764 834 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 POU3F4P49335 361 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 RAB9AP51151 201 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 TPTEP56180 551 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 BASP1P80723 227 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 CDK16Q00536 496 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 CFHR3Q02985 330 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 CRYZQ08257 329 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 CDH17Q12864 832 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 ILF3Q12906 894 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 C1orf61Q13536 156 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 ITGA9Q13797 1035 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 NFYCQ13952 458 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 VEZF1Q14119 521 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 NPTX1Q15818 432 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 EXT1Q16394 746 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 BCL2A1Q16548 175 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 DEFB133Q30KQ1 61 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC25A53Q5H9E4 307 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 PAPD7Q5XG87 772 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 PTRHD1Q6GMV3 140 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 UGT3A1Q6NUS8 523 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 RNASEKQ6P5S7 137 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 ARHGAP22Q7Z5H3 698 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 AMIGO1Q86WK6 493 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 CCDC25Q86WR0 208 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 ADGRG3Q86Y34 549 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 C10orf67Q8IYJ2 551 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 FAM58AQ8N1B3 248 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 GTPBP8Q8N3Z3 284 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 PAQR4Q8N4S7 273 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC25A41Q8N5S1 370 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 SMYD1Q8NB12 490 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 PAPD5Q8NDF8 572 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 DDHD1Q8NEL9 900 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 OR52N4Q8NGI2 321 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 OR4A15Q8NGL6 344 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 CCL4L1Q8NHW4 92 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 BLOC1S5Q8TDH9 187 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 NAT6Q93015 286 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZBTB8AQ96BR9 441 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 PYCR2Q96C36 320 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 COQ8BQ96D53 544 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC47A1Q96FL8 570 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZNF582Q96NG8 517 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 OR2M4Q96R27 311 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 RANBP9Q96S59 729 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 RBM4BQ9BQ04 359 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 RBM4Q9BWF3 364 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 GSDMCQ9BYG8 508 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 ROGDIQ9GZN7 287 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 L2HGDHQ9H9P8 463 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 SEBOXQ9HB31 216 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 MAN2C1Q9NTJ4 1040 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 NLE1Q9NVX2 485 aaPredicted RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 EURLQ9NYK6 297 aa4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 CISD1Q9NZ45 108 aaKnown RBP4.87□□□□□ -1.63
HMGB3P7-201ENST00000400214 SMARCAL1Q9NZC9 954 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms