RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ACOT4Q8N9L9 421 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 SLC16A11Q8NCK7 471 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 ADAMTS15Q8TE58 950 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 TRIM43Q96BQ3 446 aaPredicted RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 ELP4Q96EB1 424 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 ZNF514Q96K75 400 aaPredicted RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 PRSS27Q9BQR3 290 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 KLK11Q9UBX7 282 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 ST6GALNAC2Q9UJ37 374 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 RABL2BQ9UNT1 228 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 STX11O75558 287 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 C4BPBP20851 252 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 NFYAP23511 347 aaPredicted RBP12.94□□□□□ -0.34
APOB-202ENST00000399256 CRMP1Q14194 572 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 SLC39A11Q8N1S5 342 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 FAM98AQ8NCA5 519 aaKnown RBP12.94□□□□□ -0.34
APOB-202ENST00000399256 TCEAL4Q96EI5 215 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 SGTBQ96EQ0 304 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 ZNF558Q96NG5 402 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 MENTQ9BUN1 341 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 CD93Q9NPY3 652 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 INPP5EQ9NRR6 644 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 CALML5Q9NZT1 146 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 EMC3Q9P0I2 261 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 WNT6Q9Y6F9 365 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 HEATR5BQ9P2D3 2071 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 LRRK1Q38SD2 2015 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 TRAV27A0A087WT01 109 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 A0A1B0GUH1 482 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 CCL16O15467 120 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 PRAF2O60831 178 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 BCL6P41182 706 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 GDI2P50395 445 aaKnown RBP12.94□□□□□ -0.34
APOB-202ENST00000399256 UBE2NLQ5JXB2 153 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 FAM69AQ5T7M9 428 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 FAM111BQ6SJ93 734 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 LNX2Q8N448 690 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 OR51A7Q8NH64 312 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 NOX3Q9HBY0 568 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 CMC2Q9NRP2 79 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 GPR34Q9UPC5 381 aa12.94□□□□□ -0.34
APOB-202ENST00000399256 PCDHGA9Q9Y5G4 932 aaKnown RBP12.94□□□□□ -0.34
APOB-202ENST00000399256 TRAV1-2A0A0B4J238 106 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.93□□□□□ -0.34
APOB-202ENST00000399256 MCRIP1C9JLW8 97 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 ARPC5O15511 151 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 CLEC3AO75596 197 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 NT5EP21589 574 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 HIST1H1TP22492 207 aaPredicted RBP12.93□□□□□ -0.34
APOB-202ENST00000399256 GPR68Q15743 365 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 DOK4Q8TEW6 326 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 COL26A1Q96A83 441 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 SLC25A18Q9H1K4 315 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 CLDND1Q9NY35 253 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 PFDN2Q9UHV9 154 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 ING1Q9UK53 422 aaPredicted RBP12.93□□□□□ -0.34
APOB-202ENST00000399256 BAIAP2Q9UQB8 552 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 COL4A6Q14031 1691 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 CHURC1-FNTBB4DL54 471 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 CTDSPLO15194 276 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 SUSD5O60279 629 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 TIMP1P01033 207 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 ATP1B1P05026 303 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 ZNF136P52737 540 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 OC90Q02509 493 aaPredicted RBP12.93□□□□□ -0.34
APOB-202ENST00000399256 ARHGAP19Q14CB8 494 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 OVCH2Q7RTZ1 564 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 TEX19Q8NA77 164 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 ARRDC3Q96B67 414 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 MOAP1Q96BY2 351 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 ACTRT3Q9BYD9 372 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 TTYH1Q9H313 450 aaPredicted RBP12.93□□□□□ -0.34
APOB-202ENST00000399256 NANSQ9NR45 359 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 ZNF223Q9UK11 482 aaPredicted RBP12.93□□□□□ -0.34
APOB-202ENST00000399256 FBXL2Q9UKC9 423 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 PPP1R3DO95685 299 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 ASGR2P07307 311 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 F3P13726 295 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 GLULP15104 373 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 HTR2AP28223 471 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 MPIP34949 423 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 TPMTP51580 245 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 CLDN12P56749 244 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 CAMK1Q14012 370 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 HLXQ14774 488 aaPredicted RBP12.93□□□□□ -0.34
APOB-202ENST00000399256 LINC00303Q3SY05 128 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 SLC48A1Q6P1K1 146 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 TFAP2EQ6VUC0 442 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 GLDNQ6ZMI3 551 aaPredicted RBP12.93□□□□□ -0.34
APOB-202ENST00000399256 FAM71CQ8NEG0 241 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 OR51L1Q8NGJ5 315 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 OR52B4Q8NGK2 314 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 TMEM239Q8WW34 195 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 MS4A6EQ96DS6 147 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 GIMAP5Q96F15 307 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 PDCD1LG2Q9BQ51 273 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 PCBD2Q9H0N5 130 aa12.93□□□□□ -0.34
APOB-202ENST00000399256 COPS3Q9UNS2 423 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms