RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 IGF2P01344 180 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 KHKP50053 298 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 ERVK-25P63136 954 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 RPE65Q16518 533 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 BEX5Q5H9J7 111 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 NHLRC3Q5JS37 347 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 CLVS2Q5SYC1 327 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 HEPHL1Q6MZM0 1159 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 TMEM88Q6PEY1 159 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 CD300LDQ6UXZ3 194 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 ZNF620Q6ZNG0 422 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 HDDC2Q7Z4H3 204 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 SLC44A3Q8N4M1 653 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 HDDC3Q8N4P3 179 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 OR52L1Q8NGH7 329 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 SUN3Q8TAQ9 357 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 C2orf15Q8WU43 125 aaKnown RBP9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 TFGQ92734 400 aaPredicted RBP9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 UBL7Q96S82 380 aaPredicted RBP9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 REG4Q9BYZ8 158 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 A0A0G2JK05 382 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 FAM171A2A8MVW0 826 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 EGFP01133 1207 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 NAT2P11245 290 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 EPHA1P21709 976 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 CCR9P51686 369 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 ATXN7L3Q14CW9 347 aaPredicted RBP9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 KIAA1211LQ6NV74 962 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 MEPCEQ7L2J0 689 aaKnown RBP9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 FGD2Q7Z6J4 655 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 VN1R2Q8NFZ6 395 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 OR13C2Q8NGS9 318 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 FANK1Q8TC84 345 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 GRHL3Q8TE85 626 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 TIFAQ96CG3 184 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 PEX11GQ96HA9 241 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 ZNF416Q9BWM5 594 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 LHX9Q9NQ69 397 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 ATG4BQ9Y4P1 393 aa9.15□□□□□ -0.94
PTCHD4-202ENST00000398738 CENPVL1A0A0U1RR11 272 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 MFSD2BA6NFX1 497 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 IDSB3KWA1 339 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 LEFTY2O00292 366 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 GRM6O15303 877 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 IGHA1P01876 353 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 THY1P04216 161 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 CTSLP07711 333 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SELPP16109 830 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 PDX1P52945 283 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 TAS2R38P59533 333 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 PITPNAQ00169 270 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ID2Q02363 134 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 PRKCZQ05513 592 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 STX4Q12846 297 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 CRMP1Q14194 572 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 HLXQ14774 488 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 TCTN1Q2MV58 587 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 LINC00303Q3SY05 128 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 LRRC37A5PQ49AS3 106 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 HSD17B12Q53GQ0 312 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 FAM46CQ5VWP2 391 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 Q6ZNB5 142 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 OR8K3Q8NH51 312 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ACOT11Q8WXI4 607 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ING5Q8WYH8 240 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 DIO2Q92813 273 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 PTP4A1Q93096 173 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 RGMAQ96B86 450 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 OR7D2Q96RA2 312 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 TIMP4Q99727 224 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SARGQ9BW04 601 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 MS4A8Q9BY19 250 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SHARPINQ9H0F6 387 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 DNAJB12Q9NXW2 375 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 GNG8Q9UK08 70 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SCN8AQ9UQD0 1980 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 TET1Q8NFU7 2136 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 RP2O75695 350 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 HMGN1P05114 100 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ZGLP1P0C6A0 271 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 EPXP11678 715 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SOX2P48431 317 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC22A10Q63ZE4 541 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC6A19Q695T7 634 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 NIPAL3Q6P499 406 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 LINC00471Q8N535 108 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 PCSK9Q8NBP7 692 aaKnown RBP9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC16A11Q8NCK7 471 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 ADAMTS15Q8TE58 950 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SOCS4Q8WXH5 440 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 OVCA2Q8WZ82 227 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SMPDL3BQ92485 455 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 PPP1R16AQ96I34 528 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 MNTQ99583 582 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 TEAD3Q99594 435 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 LGR4Q9BXB1 951 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SLC38A1Q9H2H9 487 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SYNPO2LQ9H987 977 aa9.14□□□□□ -0.95
PTCHD4-202ENST00000398738 SCN3AQ9NY46 2000 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms