RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 KLHL9Q9P2J3 617 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 GPR52Q9Y2T5 361 aa11.95□□□□□ -0.5
VCX3A-202ENST00000398729 ANK3Q12955 4377 aaKnown RBP11.95□□□□□ -0.5
VCX3A-202ENST00000398729 HIVEP2P31629 2446 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 PRAMEF27A3QJZ7 478 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 KRT75O95678 551 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 GSNP06396 782 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 YES1P07947 543 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 INHBBP09529 407 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 CD53P19397 219 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 ENPP1P22413 925 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 RYKP34925 604 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 CHRNEQ04844 493 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 SYPL1Q16563 259 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 PLEKHM3Q6ZWE6 761 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 ARFGAP2Q8N6H7 521 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 ANKFN1Q8N957 763 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 SLC25A43Q8WUT9 341 aaPredicted RBP11.94□□□□□ -0.5
VCX3A-202ENST00000398729 ZNF75CPQ92670 426 aaPredicted RBP11.94□□□□□ -0.5
VCX3A-202ENST00000398729 MARK4Q96L34 752 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 OR10A4Q9H209 315 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 EXOSC3Q9NQT5 275 aaKnown RBP11.94□□□□□ -0.5
VCX3A-202ENST00000398729 BEX4Q9NWD9 120 aaPredicted RBP11.94□□□□□ -0.5
VCX3A-202ENST00000398729 ZIM2Q9NZV7 527 aa11.94□□□□□ -0.5
VCX3A-202ENST00000398729 SPIN1Q9Y657 262 aaPredicted RBP11.94□□□□□ -0.5
VCX3A-202ENST00000398729 IGHV3-15A0A0B4J1V0 119 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 CLDN24A6NM45 220 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 UBDO15205 165 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 BCAS1O75363 584 aaPredicted RBP11.93□□□□□ -0.5
VCX3A-202ENST00000398729 ANP32DO95626 131 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 C1QCP02747 245 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 THBDP07204 575 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 NR2F1P10589 423 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 PSMB1P20618 241 aaKnown RBP11.93□□□□□ -0.5
VCX3A-202ENST00000398729 APOBEC1P41238 236 aaKnown RBP11.93□□□□□ -0.5
VCX3A-202ENST00000398729 MAGEA8P43361 318 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 CSNK2A1P68400 391 aaPredicted RBP11.93□□□□□ -0.5
VCX3A-202ENST00000398729 RASGEF1BQ0VAM2 473 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 GNA13Q14344 377 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 SYT14P1Q58G82 188 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 BEX5Q5H9J7 111 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 CLEC9AQ6UXN8 241 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 TFAP2EQ6VUC0 442 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 DNAJC14Q6Y2X3 702 aaPredicted RBP11.93□□□□□ -0.5
VCX3A-202ENST00000398729 LRRC74BQ6ZQY2 392 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 TMPPEQ6ZT21 453 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 C22orf34Q6ZV56 151 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 NUFIP2Q7Z417 695 aaKnown RBP11.93□□□□□ -0.5
VCX3A-202ENST00000398729 MAVSQ7Z434 540 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 HMGN2P46Q86SG4 172 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 CMIPQ8IY22 773 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 STEAP2Q8NFT2 490 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 PNPT1Q8TCS8 783 aaKnown RBP11.93□□□□□ -0.5
VCX3A-202ENST00000398729 OR52B2Q96RD2 323 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 HDHD5Q9BXW7 423 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 ACTR6Q9GZN1 396 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 SLC38A1Q9H2H9 487 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 RMND5AQ9H871 391 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 MTHFD2LQ9H903 347 aaPredicted RBP11.93□□□□□ -0.5
VCX3A-202ENST00000398729 BCO1Q9HAY6 547 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 SDR39U1Q9NRG7 319 aaPredicted RBP11.93□□□□□ -0.5
VCX3A-202ENST00000398729 CHRNA9Q9UGM1 479 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 USH1CQ9Y6N9 552 aa11.93□□□□□ -0.5
VCX3A-202ENST00000398729 AGAP5A6NIR3 686 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 SULT2B1O00204 365 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 SMAD9O15198 467 aaKnown RBP11.92□□□□□ -0.5
VCX3A-202ENST00000398729 CYTIPO60759 359 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 LY6G6DO95868 133 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 CHRM4P08173 479 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 ZCCHC18P0CG32 403 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 TFPIP10646 304 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 IL7RP16871 459 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 FPR1P21462 350 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 FKBP2P26885 142 aaKnown RBP11.92□□□□□ -0.5
VCX3A-202ENST00000398729 DIO1P49895 249 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 ACKR1Q16570 336 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 COX20Q5RI15 118 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 MSANTD1Q6ZTZ1 278 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 GRINAQ7Z429 371 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 CXorf67Q86X51 503 aaPredicted RBP11.92□□□□□ -0.5
VCX3A-202ENST00000398729 GABRG1Q8N1C3 465 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 WDR60Q8WVS4 1066 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 PMM1Q92871 262 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 PIGTQ969N2 578 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 ZHX1-C8orf76Q96EF9 292 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 ITCHQ96J02 903 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 HS3ST6Q96QI5 342 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 PSD2Q9BQI7 771 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 CCDC106Q9BWC9 280 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 UBTD1Q9HAC8 227 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 CTPS2Q9NRF8 586 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 P2RX2Q9UBL9 471 aa11.92□□□□□ -0.5
VCX3A-202ENST00000398729 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.91□□□□□ -0.5
VCX3A-202ENST00000398729 KLF4O43474 513 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 GCM2O75603 506 aaPredicted RBP11.91□□□□□ -0.5
VCX3A-202ENST00000398729 HEXAP06865 529 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 DBIP07108 87 aaKnown RBP11.91□□□□□ -0.5
VCX3A-202ENST00000398729 FESP07332 822 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 UQCRBP14927 111 aa11.91□□□□□ -0.5
VCX3A-202ENST00000398729 RPS4Y1P22090 263 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms