RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ALG14Q96F25 216 aa13.24□□□□□ -0.29
PCDHGA11-201ENST00000398587 LCORQ96JN0 433 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA11-201ENST00000398587 IKZF5Q9H5V7 419 aa13.24□□□□□ -0.29
PCDHGA11-201ENST00000398587 C6orf106Q9H6K1 298 aaPredicted RBP13.24□□□□□ -0.29
PCDHGA11-201ENST00000398587 MICAL3Q7RTP6 2002 aa13.24□□□□□ -0.29
PCDHGA11-201ENST00000398587 TMX2-CTNND1H3BSU7 103 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 SMAD9O15198 467 aaKnown RBP13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 SCGNO76038 276 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 TRHRP34981 398 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 NXNL2Q5VZ03 156 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 SFRP4Q6FHJ7 346 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 GALNT6Q8NCL4 622 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 ADAMTS14Q8WXS8 1223 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 OR2B2Q9GZK3 357 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 MKRN2Q9H000 416 aaKnown RBP13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 SIT1Q9Y3P8 196 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 SCRG1O75711 98 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 CLUP10909 449 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 IDUAP35475 653 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 TMEM244Q5VVB8 128 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 DGLUCYQ7Z3D6 616 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 GDF7Q7Z4P5 450 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 ZNF582Q96NG8 517 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 TNFRSF13CQ96RJ3 184 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 ZNF587Q96SQ5 575 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 MRPL15Q9P015 296 aaKnown RBP13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 MGAT4CQ9UBM8 478 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 MGAT4AQ9UM21 535 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 RPH3AQ9Y2J0 694 aaPredicted RBP13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 IGLV3-16A0A075B6K0 115 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 EFCAB7A8K855 629 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 CTDSP2O14595 271 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 HCRTR1O43613 425 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 SEC14L2O76054 403 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 FBXO45P0C2W1 286 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 POU3F4P49335 361 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 HSD17B7P56937 341 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 RIPPLY1Q0D2K3 151 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 MALLQ13021 153 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 TPRA1Q86W33 373 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 LMF1Q96S06 567 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 STACQ99469 402 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 KATNB1Q9BVA0 655 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 IRF2BPLQ9H1B7 796 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 DHCR7Q9UBM7 475 aaKnown RBP13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 DIMT1Q9UNQ2 313 aaKnown RBP13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 ICKQ9UPZ9 632 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 MAB21L2Q9Y586 359 aa13.23□□□□□ -0.29
PCDHGA11-201ENST00000398587 ACOT7O00154 380 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 PRR35P0CG20 571 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 AMY2BP19961 511 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 GABRA5P31644 462 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 SELENOVP59797 346 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 GXYLT1Q4G148 440 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 KIAA1958Q8N8K9 716 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 SLC7A13Q8TCU3 470 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 EDAQ92838 391 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 MNTQ99583 582 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 TMEM246Q9BRR3 403 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 PHF7Q9BWX1 381 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 CD93Q9NPY3 652 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 WBP1LQ9NX94 342 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 GSKIPQ9P0R6 139 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 ALG5Q9Y673 324 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 GABARAPO95166 117 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 LGI1O95970 557 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 MRPS10P82664 201 aaKnown RBP13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 C5orf46Q6UWT4 87 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 OLIG3Q7RTU3 272 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 MRGPRX1Q96LB2 322 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 SLC6A7Q99884 636 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 ZNF385DQ9H6B1 395 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 KLF15Q9UIH9 416 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 HHLA2Q9UM44 414 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 C19orf53Q9UNZ5 99 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 RASD1Q9Y272 281 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 TCRBV5S2A0A599 114 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 SCGB1D2O95969 90 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 SCG5P05408 212 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 ATXN7L3Q14CW9 347 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 SF3A2Q15428 464 aaKnown RBP13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 GRK1Q15835 563 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 PLK5Q496M5 336 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 TMEM196Q5HYL7 178 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 C1orf53Q5VUE5 145 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 RPL22L1Q6P5R6 122 aaKnown RBP13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 ARL14Q8N4G2 192 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 ACER3Q9NUN7 267 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 V9GY05 133 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 KRBA1A5PL33 1030 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 ETHE1O95571 254 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 F13BP05160 661 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 MMP11P24347 488 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 TACR3P29371 465 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 SSTR4P31391 388 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 HTRA4P83105 476 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 C14orf28Q4W4Y0 310 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 CMIPQ8IY22 773 aa13.22□□□□□ -0.29
PCDHGA11-201ENST00000398587 SLC35F3Q8IY50 421 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms