RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 RPS17P08708 135 aaKnown RBP10.59□□□□□ -0.71
TTC28-201ENST00000397906 HSD17B7P56937 341 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 SMAD4Q13485 552 aaKnown RBP10.59□□□□□ -0.71
TTC28-201ENST00000397906 FAM111BQ6SJ93 734 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 SLC35D2Q76EJ3 337 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 DDX31Q9H8H2 851 aaKnown RBP10.59□□□□□ -0.71
TTC28-201ENST00000397906 HIF1ANQ9NWT6 349 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 TOGARAM1Q9Y4F4 1720 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 ARHGEF15O94989 841 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 TMEM150AQ86TG1 271 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 ZFPM2Q8WW38 1151 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 NRSN2Q9GZP1 204 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 SPHK1Q9NYA1 384 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 DVL2O14641 736 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 AAED1Q7RTV5 226 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 SLC16A9Q7RTY1 509 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 RTN4RL1Q86UN2 441 aaPredicted RBP10.59□□□□□ -0.71
TTC28-201ENST00000397906 NTMT1Q9BV86 223 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 MED20Q9H944 212 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 RAB9BQ9NP90 201 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 SOBPA7XYQ1 873 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 MSR1P21757 451 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 SNTB2Q13425 540 aaKnown RBP10.59□□□□□ -0.71
TTC28-201ENST00000397906 SLC6A19Q695T7 634 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 FBXW12Q6X9E4 464 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 SYT3Q9BQG1 590 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 OR52D1Q9H346 318 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 GCM1Q9NP62 436 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 SDK1Q7Z5N4 2213 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 GABBR2O75899 941 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 TNFSF15O95150 251 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 TBRG1Q3YBR2 411 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 ADAMTSL4Q6UY14 1074 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 I3L521 148 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 FOXD2O60548 495 aaPredicted RBP10.59□□□□□ -0.71
TTC28-201ENST00000397906 SERPINE2P07093 398 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 MYF5P13349 255 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 SLC5A12Q1EHB4 618 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 EDEM2Q9BV94 578 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 WASH6PQ9NQA3 447 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 TFPTP0C1Z6 253 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 ENPP1P22413 925 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 MMP12P39900 470 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 ETV4P43268 484 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 MGAT3Q09327 533 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 HES1Q14469 280 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 KIF18BQ86Y91 864 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 ZNF687Q8N1G0 1237 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 CREB3L1Q96BA8 519 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 PRRC1Q96M27 445 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 C3orf30Q96M34 536 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 PIGQQ9BRB3 760 aa10.59□□□□□ -0.71
TTC28-201ENST00000397906 TMEM269A0A1B0GVZ9 245 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 SNNO75324 88 aaPredicted RBP10.58□□□□□ -0.72
TTC28-201ENST00000397906 CCDC71LQ8N9Z2 235 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 ACBD4Q8NC06 268 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 A0A1B0GX78 115 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 SSTR4P31391 388 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 ELF4Q99607 663 aaPredicted RBP10.58□□□□□ -0.72
TTC28-201ENST00000397906 ANKRD36CQ5JPF3 1778 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 MYBPHQ13203 477 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 SCCPDHQ8NBX0 429 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 OR13C2Q8NGS9 318 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 ABCG5Q9H222 651 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 GMEB1Q9Y692 573 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 UTS2O95399 124 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 SLC22A10Q63ZE4 541 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 NDUFAF7Q7L592 441 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 PSMF1Q92530 271 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 GPR148Q8TDV2 347 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 CASC3O15234 703 aaKnown RBP10.58□□□□□ -0.72
TTC28-201ENST00000397906 TUSC2O75896 110 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 OR1N1Q8NGS0 311 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 SLC37A2Q8TED4 501 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 MSANTD3Q96H12 275 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 SLC41A2Q96JW4 573 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 THSD1Q9NS62 852 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 NRG2O14511 850 aaPredicted RBP10.58□□□□□ -0.72
TTC28-201ENST00000397906 LRRTM2O43300 516 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 GALR3O60755 368 aaPredicted RBP10.58□□□□□ -0.72
TTC28-201ENST00000397906 PODNL1Q6PEZ8 512 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 BAIAP2L2Q6UXY1 529 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 PRICKLE2Q7Z3G6 844 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 BATF2Q8N1L9 274 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 SULT4A1Q9BR01 284 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 SAP130Q9H0E3 1048 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 CREBL2O60519 120 aaPredicted RBP10.58□□□□□ -0.72
TTC28-201ENST00000397906 ABLIM3O94929 683 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 IMPA1P29218 277 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 CAV3P56539 151 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 ACTBP60709 375 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 ACTG1P63261 375 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 ANKRD33Q7Z3H0 272 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 CHCHD4Q8N4Q1 142 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 BHLHE23Q8NDY6 225 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 OR11L1Q8NGX0 322 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 MKS1Q9NXB0 559 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 DUSP6Q16828 381 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 MMP27Q9H306 513 aa10.58□□□□□ -0.72
TTC28-201ENST00000397906 EGLN3Q9H6Z9 239 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms