RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SLITRK4Q8IW52 837 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 SAMD12Q8N8I0 201 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 OR8D1Q8WZ84 308 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 CNOT9Q92600 299 aaKnown RBP14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 KAT2AQ92830 837 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 KCTD12Q96CX2 325 aaKnown RBP14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 C10orf90Q96M02 699 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 ABHD1Q96SE0 405 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 SMAD5Q99717 465 aaKnown RBP14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 TMPRSS13Q9BYE2 586 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 FN3KQ9H479 309 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 WBP1LQ9NX94 342 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 RPS6KB2Q9UBS0 482 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 C5orf42Q9H799 3197 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 TRAV20A0A0B4J274 112 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 CDC42EP2O14613 210 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 CLEC3AO75596 197 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 ZIC2O95409 532 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 SLC35G4P0C7Q5 338 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 SHC1P29353 583 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 BCL6P41182 706 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 STAT5AP42229 794 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 GCGRP47871 477 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 CLDN2P57739 230 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 OR10A3P58181 314 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 TRA2BP62995 288 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 RNASE12Q5GAN4 147 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 TMEM240Q5SV17 173 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 SFRP5Q5T4F7 317 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 RAB11FIP2Q7L804 512 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 CXXC5Q7LFL8 322 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 GDF7Q7Z4P5 450 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 SPRED2Q7Z698 418 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 GRASPQ7Z6J2 395 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 SFTPA1Q8IWL2 248 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 NUP43Q8NFH3 380 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 OR56A1Q8NGH5 318 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 CXorf40AQ8TE69 158 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 ZDHHC1Q8WTX9 485 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 ACOT11Q8WXI4 607 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 BADQ92934 168 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 LRRC3BQ96PB8 259 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 MCHR1Q99705 422 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 CHIAQ9BZP6 476 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 BABAM2Q9NXR7 383 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 NLGN3Q9NZ94 848 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 TEX46H3BTG2 121 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 SYT5O00445 386 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 PRAF2O60831 178 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 HNRNPA1P09651 372 aaKnown RBP eCLIP14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 ADH5P11766 374 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 CEBPBP17676 345 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 FUT1P19526 365 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 TBXA2RP21731 343 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 SDHBP21912 280 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 ATP5A1P25705 553 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 CERS1P27544 350 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 ACSM1Q08AH1 577 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 METRNLQ641Q3 311 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 TMEM99Q8N816 258 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 ACOT4Q8N9L9 421 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 CAMKVQ8NCB2 501 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 OR2T33Q8NG76 320 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 SFXN5Q8TD22 340 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 SLC41A3Q96GZ6 507 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 LCORQ96JN0 433 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 ALG8Q9BVK2 526 aa14.81□□□□□ -0.04
CHMP1A-201ENST00000397901 RNGTTO60942 597 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 PEX14O75381 377 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 NFATC1O95644 943 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 GALP22466 123 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 S100A11P31949 105 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 MTNR1BP49286 362 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 PDX1P52945 283 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 PRR5P85299 388 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 ARL9Q6T311 187 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 CCDC36Q8IYA8 594 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 CLEC4AQ9UMR7 237 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 RASD1Q9Y272 281 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 A0A1B0GW55 424 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 ANTXRLA6NF34 631 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 SSX5O60225 188 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 GLAP06280 429 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 DUX4L2P0CJ85 424 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 DUX4L3P0CJ86 424 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 DUX4L4P0CJ87 422 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 DUX4L5P0CJ88 424 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 DUX4L6P0CJ89 424 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 DUX4L7P0CJ90 424 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 NDUFV2P19404 249 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 PAICSP22234 425 aaKnown RBP14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 HIST1H1TP22492 207 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 HSD17B2P37059 387 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 VASPP50552 380 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 RNF144AP50876 292 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 GK2Q14410 553 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 TMEM44Q2T9K0 475 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 HFEQ30201 348 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 SLC22A10Q63ZE4 541 aa14.8□□□□□ -0.04
CHMP1A-201ENST00000397901 ERN2Q76MJ5 926 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms