RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ZNF583Q96ND8 569 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 CTPS2Q9NRF8 586 aa19.05■□□□□ 0.64
TSPAN4-206ENST00000397408 SLC22A20A6NK97 555 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 HSPB2A8KAH6 182 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 FAM220BPB1ANY3 271 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 ADAMDEC1O15204 470 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 TPST1O60507 370 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 GCM2O75603 506 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 MFN2O95140 757 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 CLDN14O95500 239 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 TGM6O95932 706 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 SLC7A2P52569 658 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 DMTNQ08495 405 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 PON3Q15166 354 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 HSPB2Q16082 182 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 TMEM176BQ3YBM2 270 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 GLIPR1L2Q4G1C9 344 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 HBMQ6B0K9 141 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 PPP4R4Q6NUP7 873 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 C8orf82Q6P1X6 216 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 ERICH5Q6P6B1 374 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 MAMDC2Q7Z304 686 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 PATL1Q86TB9 770 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 SLC15A3Q8IY34 581 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 FIG4Q92562 907 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 TM9SF2Q99805 663 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 HOPXQ9BPY8 73 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 SERINC1Q9NRX5 453 aa19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 FLNBO75369 2602 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-206ENST00000397408 ASH1LQ9NR48 2969 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 FAM90A27PA6NNH2 459 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 M0QX08 132 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 CXCL13O43927 109 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 SLC7A1P30825 629 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 APOBEC1P41238 236 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 SLC1A3P43003 542 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 COPZ1P61923 177 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 HOXC5Q00444 222 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 PDSS1Q5T2R2 415 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 FAM91A1Q658Y4 838 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 CADM2Q8N3J6 435 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 SMYD1Q8NB12 490 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 OR2T12Q8NG77 320 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 FNDC9Q8TBE3 224 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 SLC35B4Q969S0 331 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 ARL8BQ9NVJ2 186 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 PLEKHB1Q9UF11 243 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 CHRNA9Q9UGM1 479 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 TAGLN3Q9UI15 199 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 SLC13A4Q9UKG4 626 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 AP3M1Q9Y2T2 418 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 ZNF175Q9Y473 711 aa19.03■□□□□ 0.64
TSPAN4-206ENST00000397408 TMIGD3P0DMS9 266 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 TACR3P29371 465 aa19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 HTR3AP46098 478 aa19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 POLR2HP52434 150 aaKnown RBP19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 ZNF136P52737 540 aa19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 LSRQ86X29 649 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 GCNT2Q8N0V5 402 aa19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 BHLHE22Q8NFJ8 381 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 LILRB4Q8NHJ6 448 aa19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 SLC25A43Q8WUT9 341 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 TAMM41Q96BW9 452 aa19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 COQ10BQ9H8M1 238 aa19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 PAQR5Q9NXK6 330 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 GMPR2Q9P2T1 348 aaKnown RBP19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 OSGIN1Q9UJX0 560 aa19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 SPIN1Q9Y657 262 aaPredicted RBP19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 MED12LQ86YW9 2145 aa19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 INTS1Q8N201 2190 aaKnown RBP19.02■□□□□ 0.64
TSPAN4-206ENST00000397408 NME4O00746 187 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 NDUFAB1O14561 156 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 CCNA2P20248 432 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 PSME3P61289 254 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 LIPEQ05469 1076 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 VEZF1Q14119 521 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 SYT14P1Q58G82 188 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 WBP2NLQ6ICG8 309 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 LIX1LQ8IVB5 337 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 MICU2Q8IYU8 434 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 FITM2Q8N6M3 262 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 SLC26A7Q8TE54 656 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 OSTF1Q92882 214 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 INTS12Q96CB8 462 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 ZFP3Q96NJ6 502 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 OR5B2Q96R09 309 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 UCK2Q9BZX2 261 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 KLHL28Q9NXS3 571 aa19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 MCTS1Q9ULC4 181 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 KLF2Q9Y5W3 355 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-206ENST00000397408 TMED7-TICAM2A0A0A6YYA0 188 aa19■□□□□ 0.63
TSPAN4-206ENST00000397408 A0A1W2PNR3 127 aa19■□□□□ 0.63
TSPAN4-206ENST00000397408 PRSS44E7EML9 344 aa19■□□□□ 0.63
TSPAN4-206ENST00000397408 RCBTB2O95199 551 aa19■□□□□ 0.63
TSPAN4-206ENST00000397408 SYNGR4O95473 234 aa19■□□□□ 0.63
TSPAN4-206ENST00000397408 TFPIP10646 304 aa19■□□□□ 0.63
TSPAN4-206ENST00000397408 FCGR2AP12318 317 aa19■□□□□ 0.63
TSPAN4-206ENST00000397408 BMP5P22003 454 aa19■□□□□ 0.63
TSPAN4-206ENST00000397408 CRYBA2P53672 197 aa19■□□□□ 0.63
TSPAN4-206ENST00000397408 CARD18P57730 90 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms