RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 HOXD1Q9GZZ0 328 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 DUSP22Q9NRW4 184 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 ASB6Q9NWX5 421 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 GIN1Q9NXP7 522 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 CARD8Q9Y2G2 431 aa8.22□□□□□ -1.09
NEDD9-203ENST00000397378 POLR3HQ9Y535 204 aaPredicted RBP8.22□□□□□ -1.09
NEDD9-203ENST00000397378 WNK2Q9Y3S1 2297 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 A0A1W2PR80 420 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 NPIPB8E9PQR5 432 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 PDLIM1O00151 329 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 GPR171O14626 319 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 RSL1D1O76021 490 aaKnown RBP8.21□□□□□ -1.1
NEDD9-203ENST00000397378 H6PDO95479 791 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 IGHV3-9P01782 118 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 ITGA5P08648 1049 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 ATP6V1C1P21283 382 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 DIO1P49895 249 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 CSNK2A1P68400 391 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-203ENST00000397378 OCLNQ16625 522 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 IMPG1Q17R60 797 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 ZSWIM7Q19AV6 140 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 ZNF385BQ569K4 471 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 TEX35Q5T0J7 233 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 UGT2A3Q6UWM9 527 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 LRIG3Q6UXM1 1119 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 TMPPEQ6ZT21 453 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 SZRD1Q7Z422 152 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 MTDHQ86UE4 582 aaKnown RBP8.21□□□□□ -1.1
NEDD9-203ENST00000397378 C1QL4Q86Z23 238 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 C17orf78Q8N4C9 275 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 ANKS4BQ8N8V4 417 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 C1orf162Q8NEQ5 155 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-203ENST00000397378 TOR1AIP2Q8NFQ8 470 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 OR5W2Q8NH69 310 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 FBXO30Q8TB52 745 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 CIDECQ96AQ7 238 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-203ENST00000397378 FBXO17Q96EF6 278 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 L3HYPDHQ96EM0 354 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 C16orf58Q96GQ5 468 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 OR5B2Q96R09 309 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 KCNA7Q96RP8 456 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 PAFAH2Q99487 392 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 CDC42EP4Q9H3Q1 356 aaKnown RBP8.21□□□□□ -1.1
NEDD9-203ENST00000397378 PIGUQ9H490 435 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 ACSS1Q9NUB1 689 aaPredicted RBP8.21□□□□□ -1.1
NEDD9-203ENST00000397378 DDX28Q9NUL7 540 aaKnown RBP8.21□□□□□ -1.1
NEDD9-203ENST00000397378 AMDHD2Q9Y303 409 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 NOSIPQ9Y314 301 aaKnown RBP8.21□□□□□ -1.1
NEDD9-203ENST00000397378 GRIP1Q9Y3R0 1128 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 TRAF6Q9Y4K3 522 aa8.21□□□□□ -1.1
NEDD9-203ENST00000397378 ZNF716A6NP11 495 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 TRIM49D1C9J1S8 452 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 NPIPB9F8W1W9 429 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 GTPBP1O00178 669 aaKnown RBP8.2□□□□□ -1.1
NEDD9-203ENST00000397378 EIF4E2O60573 245 aaKnown RBP8.2□□□□□ -1.1
NEDD9-203ENST00000397378 DNAJA2O60884 412 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 LILRA1O75019 489 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 TACSTD2P09758 323 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 PRPH2P23942 346 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 ATP5F1P24539 256 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-203ENST00000397378 GIFP27352 417 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 NTF4P34130 210 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 SLC16A1P53985 500 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 PRKAA2P54646 552 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 ATP12AP54707 1039 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 FOXG1P55316 489 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-203ENST00000397378 FOXA1P55317 472 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 SNRPD2P62316 118 aaKnown RBP8.2□□□□□ -1.1
NEDD9-203ENST00000397378 UBA52P62987 128 aaKnown RBP8.2□□□□□ -1.1
NEDD9-203ENST00000397378 C2orf54Q08AI8 447 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 MLC1Q15049 377 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 KIAA0040Q15053 153 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 QPRTQ15274 297 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 TIGD2Q4W5G0 525 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.2□□□□□ -1.1
NEDD9-203ENST00000397378 SLC46A3Q7Z3Q1 461 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 LCA5Q86VQ0 697 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 RELL1Q8IUW5 271 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 SLC22A9Q8IVM8 553 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 ZDHHC22Q8N966 263 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 SLC25A43Q8WUT9 341 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-203ENST00000397378 ST8SIA1Q92185 356 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 JADE3Q92613 823 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 SLC6A7Q99884 636 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 C1QTNF6Q9BXI9 259 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 REEP4Q9H6H4 257 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 ANKZF1Q9H8Y5 726 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 LPAR2Q9HBW0 351 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 ESM1Q9NQ30 184 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 RRAGDQ9NQL2 400 aaPredicted RBP8.2□□□□□ -1.1
NEDD9-203ENST00000397378 SLC17A5Q9NRA2 495 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 ZDHHC18Q9NUE0 388 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 HIF1ANQ9NWT6 349 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 NINJ2Q9NZG7 142 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 TMEM216Q9P0N5 145 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 DCTN4Q9UJW0 460 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 ZNF180Q9UJW8 692 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 DTNAQ9Y4J8 743 aa8.2□□□□□ -1.1
NEDD9-203ENST00000397378 B4DSR2 109 aa8.19□□□□□ -1.1
NEDD9-203ENST00000397378 B9A039 149 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms