RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 ABCD4O14678 606 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 AZIN1O14977 448 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 RIPK2O43353 540 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 GLRA3O75311 464 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 CHEK2O96017 543 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 FGF4P08620 206 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 NEFHP12036 1026 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 CPA3P15088 417 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 SDC1P18827 310 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 COX5AP20674 150 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 IGHV1-2P23083 117 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 PTAFRP25105 342 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 CRHR1P34998 444 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 RPL3P39023 403 aaKnown RBP7.72□□□□□ -1.17
CAPN3-208ENST00000397204 CCT3P49368 545 aaKnown RBP7.72□□□□□ -1.17
CAPN3-208ENST00000397204 NUDT6P53370 316 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 IRX1P78414 480 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-208ENST00000397204 SELENBP1Q13228 472 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 PDK3Q15120 406 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 FBXW9Q5XUX1 488 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 CYB5R2Q6BCY4 276 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 KLHL17Q6TDP4 642 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 FBXL14Q8N1E6 418 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 MUC15Q8N387 334 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 NATD1Q8N6N6 113 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 NOA1Q8NC60 698 aaKnown RBP7.72□□□□□ -1.17
CAPN3-208ENST00000397204 TOR1AIP2Q8NFQ8 470 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 OR56A1Q8NGH5 318 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 OR5W2Q8NH69 310 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 OR2W6PQ8NHA6 318 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 PSMA8Q8TAA3 256 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 ADAMTS15Q8TE58 950 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 MZB1Q8WU39 189 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 OR5P2Q8WZ92 322 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 JADE3Q92613 823 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 PROX1Q92786 737 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 TSSK3Q96PN8 268 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 TRMOQ9BU70 441 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 CACNG6Q9BXT2 260 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 TNFRSF12AQ9NP84 129 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 SERINC1Q9NRX5 453 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 ZCCHC3Q9NUD5 404 aaKnown RBP7.72□□□□□ -1.17
CAPN3-208ENST00000397204 PSMC3IPQ9P2W1 217 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-208ENST00000397204 ATP6V1HQ9UI12 483 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 PRSS50Q9UI38 385 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 FAF1Q9UNN5 650 aaPredicted RBP7.72□□□□□ -1.17
CAPN3-208ENST00000397204 DTNAQ9Y4J8 743 aa7.72□□□□□ -1.17
CAPN3-208ENST00000397204 IGKV3D-15A0A087WSY6 115 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 A0A1W2PPM1 405 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 TMEM114B3SHH9 223 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 GPR171O14626 319 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 SMAD9O15198 467 aaKnown RBP7.71□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF264O43296 627 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 PLIN3O60664 434 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 DNAJA2O60884 412 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 H2AFB1P0C5Y9 115 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 H2AFB2P0C5Z0 115 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 LINC00032P0C843 101 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 DHRS4L1P0CG22 281 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 BCKDHAP12694 445 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 PTNP21246 168 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 FKBP2P26885 142 aaKnown RBP7.71□□□□□ -1.18
CAPN3-208ENST00000397204 FABP6P51161 128 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 CSNK2A1P68400 391 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-208ENST00000397204 CHRNB3Q05901 458 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 TP53BP2Q13625 1128 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 CBFBQ13951 182 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 LASP1Q14847 261 aaKnown RBP7.71□□□□□ -1.18
CAPN3-208ENST00000397204 QPRTQ15274 297 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 LSM12Q3MHD2 195 aaKnown RBP7.71□□□□□ -1.18
CAPN3-208ENST00000397204 TIGD2Q4W5G0 525 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 DCST2Q5T1A1 773 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 C1QTNF12Q5T7M4 302 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 CLEC6AQ6EIG7 209 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 OR7E24Q6IFN5 339 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 C11orf71Q6IPW1 123 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF544Q6NX49 715 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 C3orf33Q6P1S2 294 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 SLC22A25Q6T423 547 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 TMPPEQ6ZT21 453 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 MTDHQ86UE4 582 aaKnown RBP7.71□□□□□ -1.18
CAPN3-208ENST00000397204 C17orf53Q8N3J3 647 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-208ENST00000397204 OR2T11Q8NH01 316 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 CLHC1Q8NHS4 586 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 ST8SIA1Q92185 356 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 FAM168AQ92567 244 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 MOAP1Q96BY2 351 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF524Q96C55 264 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 OTUB1Q96FW1 271 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-208ENST00000397204 MUS81Q96NY9 551 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 AMBRA1Q9C0C7 1298 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 LAT2Q9GZY6 243 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 SHARPINQ9H0F6 387 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 SIRT3Q9NTG7 399 aaPredicted RBP7.71□□□□□ -1.18
CAPN3-208ENST00000397204 GPATCH2Q9NW75 528 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 NPAP1Q9NZP6 1156 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 EMC3Q9P0I2 261 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 TBK1Q9UHD2 729 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 POU2F3Q9UKI9 436 aa7.71□□□□□ -1.18
CAPN3-208ENST00000397204 PMF1-BGLAPU3KQ54 211 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms