RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 KLK11Q9UBX7 282 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 PHF11Q9UIL8 331 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 PPP1R3DO95685 299 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
NUP98-204ENST00000397004 H2AFB2P0C5Z0 115 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 CXCL2P19875 107 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 ARHGAP11BQ3KRB8 267 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 GARNL3Q5VVW2 1013 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 BTN2A1Q7KYR7 527 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 OR2L13Q8N349 312 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 POF1BQ8WVV4 589 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 SLC25A38Q96DW6 304 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 DDOQ99489 341 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 NDC1Q9BTX1 674 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 REG4Q9BYZ8 158 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 C20orf85Q9H1P6 137 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 MTHFD2LQ9H903 347 aaPredicted RBP12.86□□□□□ -0.35
NUP98-204ENST00000397004 C2orf42Q9NWW7 574 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 FLRT3Q9NZU0 649 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 RNF215Q9Y6U7 377 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 P2RX6O15547 441 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 ZNF888P0CJ79 500 aaPredicted RBP12.85□□□□□ -0.35
NUP98-204ENST00000397004 RPS4Y1P22090 263 aaKnown RBP12.85□□□□□ -0.35
NUP98-204ENST00000397004 HSD17B2P37059 387 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 RPS7P62081 194 aaKnown RBP12.85□□□□□ -0.35
NUP98-204ENST00000397004 GRK1Q15835 563 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 TMEM44Q2T9K0 475 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 COL28A1Q2UY09 1125 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 ZNF425Q6IV72 752 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 CDC73Q6P1J9 531 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 TPRA1Q86W33 373 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 SERPINA12Q8IW75 414 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 MRPL43Q8N983 215 aaKnown RBP12.85□□□□□ -0.35
NUP98-204ENST00000397004 OR2T35Q8NGX2 323 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 OR2L8Q8NGY9 312 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 LRRC20Q8TCA0 184 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 LGALS14Q8TCE9 139 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 ZPLD1Q8TCW7 415 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 PIGKQ92643 395 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 BPIFA2Q96DR5 249 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 TNFRSF13CQ96RJ3 184 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 CD180Q99467 661 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 IFT27Q9BW83 186 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 RBCK1Q9BYM8 510 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 EDDM13A0A1B0GTR0 161 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 RRASP10301 218 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 POLR2CP19387 275 aaPredicted RBP12.85□□□□□ -0.35
NUP98-204ENST00000397004 NT5EP21589 574 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 DNASE1P24855 282 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 GDNFP39905 211 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 PLA2G7Q13093 441 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 DUSP8Q13202 625 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 RUNX2Q13950 521 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 CLLU1Q5K131 121 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 FHL5Q5TD97 284 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 AGBL4Q5VU57 503 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 PRSS41Q7RTY9 318 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 ZMYND19Q96E35 227 aaPredicted RBP12.85□□□□□ -0.35
NUP98-204ENST00000397004 KLHL15Q96M94 604 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 BRD7Q9NPI1 651 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 ZNF346Q9UL40 294 aaKnown RBP12.85□□□□□ -0.35
NUP98-204ENST00000397004 COPS3Q9UNS2 423 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 LRRN3E7EW58 273 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 MID1O15344 667 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 VEGFCP49767 419 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 CLDN12P56749 244 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 RPL6Q02878 288 aaKnown RBP12.85□□□□□ -0.35
NUP98-204ENST00000397004 IRF4Q15306 451 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 ANGPT1Q15389 498 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 ZNF559Q9BR84 538 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 SEC22CQ9BRL7 303 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 ZNF350Q9GZX5 532 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 LRRN3Q9H3W5 708 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 MCCC2Q9HCC0 563 aa12.85□□□□□ -0.35
NUP98-204ENST00000397004 MRPL39Q9NYK5 338 aaKnown RBP12.85□□□□□ -0.35
NUP98-204ENST00000397004 TICRRQ7Z2Z1 1910 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 PRR23D1E9PI22 279 aaPredicted RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 PRR23D2P0DMB1 279 aaPredicted RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 SNTB2Q13425 540 aaKnown RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 EXOSC6Q5RKV6 272 aaKnown RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 RTL4Q6ZR62 310 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 MOAP1Q96BY2 351 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 ZNF436Q9C0F3 470 aaPredicted RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 NPDC1Q9NQX5 325 aaPredicted RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 MRPS2Q9Y399 296 aaKnown RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 KCNMB2Q9Y691 235 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 STON1Q9Y6Q2 735 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 TRAPPC13A5PLN9 417 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 OR7A10O76100 309 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 DDX6P26196 483 aaKnown RBP eCLIP12.84□□□□□ -0.35
NUP98-204ENST00000397004 NRG3P56975 720 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 SRSF5Q13243 272 aaKnown RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 FIGNL1Q6PIW4 674 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 GJD3Q8N144 294 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 SLC44A3Q8N4M1 653 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 RGP1Q92546 391 aaPredicted RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 ZNF707Q96C28 371 aaPredicted RBP12.84□□□□□ -0.35
NUP98-204ENST00000397004 OMA1Q96E52 524 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 POT1Q9NUX5 634 aa12.84□□□□□ -0.35
NUP98-204ENST00000397004 PPIEQ9UNP9 301 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms