RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 HLCSP50747 726 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 ATP5IP56385 69 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 MAP3K7CLP57077 242 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 RPL23AP62750 156 aaKnown RBP3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 MS4A2Q01362 244 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 DOC2AQ14183 400 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 KCNJ11Q14654 390 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 CEP85LQ5SZL2 805 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 METTL11BQ5VVY1 283 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 UQCC3Q6UW78 93 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF600Q6ZNG1 722 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 TRPM8Q7Z2W7 1104 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 HIPK1Q86Z02 1210 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 CCDC65Q8IXS2 484 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 KRT222Q8N1A0 295 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 OR2L13Q8N349 312 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 Q8N9G6 341 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 NR4A3Q92570 626 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 LRRC45Q96CN5 670 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZBED6CLQ96FA7 236 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 SH3GL1Q99961 368 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 SOSTQ9BQB4 213 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 TRIM15Q9C019 465 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 RAB20Q9NX57 234 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 CLEC5AQ9NY25 188 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 SAMD4AQ9UPU9 718 aaKnown RBP3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 STK38LQ9Y2H1 464 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 GAKO14976 1311 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 MAP3K19Q56UN5 1328 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 TTC41PQ6P2S7 1318 aa3.88□□□□□ -1.79
HMGB1P10-201ENST00000395823 A0A1B0GVL5 298 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 NCF1BA6NI72 391 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 NCF1CA8MVU1 366 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF705EA8MWA4 302 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 E9PLD3 99 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 F8VZ95 297 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 N4BP1O75113 896 aaKnown RBP3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 SH3BGRLO75368 114 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 NOL4O94818 638 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 TSPAN12O95859 305 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 NCF2P19878 526 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 BCL3P20749 454 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 IMPDH1P20839 514 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 NUP62P37198 522 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 ATP1B3P54709 279 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 HADHBP55084 474 aaKnown RBP3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 PAX2Q02962 417 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 RUNX3Q13761 415 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 RCN1Q15293 331 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 SLC22A6Q4U2R8 563 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 OTUD3Q5T2D3 398 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 TPRA1Q86W33 373 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 GPR65Q8IYL9 337 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 MCOLN2Q8IZK6 566 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 TRIML2Q8N7C3 387 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 LINC00469Q8N7U9 141 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 MAPK1IP1LQ8NDC0 245 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 FAM110BQ8TC76 370 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 VN1R17PQ8TDU5 208 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 IL1F10Q8WWZ1 152 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 PSMG2Q969U7 264 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 RPRD1AQ96P16 312 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 MCHR1Q99705 422 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 SIKE1Q9BRV8 207 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF670Q9BS34 389 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 TUBGCP2Q9BSJ2 902 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 GPR61Q9BZJ8 451 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 CAB39LQ9H9S4 337 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 POLE4Q9NR33 117 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF581Q9P0T4 197 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 SPRR3Q9UBC9 169 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 SEC14L3Q9UDX4 400 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF639Q9UID6 485 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 PDE10AQ9Y233 779 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 GMEB1Q9Y692 573 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 V9GYY5 206 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 PNPLA6Q8IY17 1366 aa3.87□□□□□ -1.79
HMGB1P10-201ENST00000395823 FAM240BA0A1B0GVZ2 78 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 BTBD17A6NE02 478 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 CACNG3O60359 315 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 RAMP3O60896 148 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 GPX5O75715 221 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 RHBDL1O75783 438 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZNF3P17036 446 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 CAPN2P17655 700 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 SERPINA2P20848 420 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 PRKACBP22694 351 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 S100A5P33763 92 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 XCR1P46094 333 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 DUSP3P51452 185 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 PRRX1P54821 245 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 CARD18P57730 90 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZFP36L1Q07352 338 aaKnown RBP3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 KLRB1Q12918 225 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 PLD1Q13393 1074 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 VGLL4Q14135 290 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 TGIF1Q15583 401 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 BEND3Q5T5X7 828 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 OR2A2Q6IF42 318 aa3.86□□□□□ -1.79
HMGB1P10-201ENST00000395823 METTL7BQ6UX53 244 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms