RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 INTS1Q8N201 2190 aaKnown RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 H3BML4 177 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 H3BNH8 94 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 RGS16O15492 202 aaPredicted RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 EIF4E2O60573 245 aaKnown RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 SCN2BO60939 215 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 SKAP2O75563 359 aaPredicted RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 AGR2O95994 175 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 RAF1P04049 648 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 HRGP04196 525 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 PABPC4LP0CB38 370 aaKnown RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 HPGDP15428 266 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 CREB1P16220 341 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 PPP3CBP16298 524 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 CRYGSP22914 178 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 DNASE1P24855 282 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 CCKARP32238 428 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 MAGEA8P43361 318 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 CPA2P48052 419 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 RPL14P50914 215 aaKnown RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 P2RX1P51575 399 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 ZNF41P51814 821 aaPredicted RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 ART1P52961 327 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 SUCLG1P53597 346 aaKnown RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 CLNS1AP54105 237 aaKnown RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 PRKAG1P54619 331 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 ATP12AP54707 1039 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 ABCE1P61221 599 aaKnown RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 HBA1P69905 142 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 ZNF117Q03924 483 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 SRYQ05066 204 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 LRRC74AQ0VAA2 488 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 STX5Q13190 355 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 TP53BP2Q13625 1128 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 LASP1Q14847 261 aaKnown RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 PON3Q15166 354 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 CD226Q15762 336 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 ZNF141Q15928 474 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 KRT71Q3SY84 523 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 KLHL26Q53HC5 615 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 FBLN7Q53RD9 439 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 DCST2Q5T1A1 773 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 PDSS1Q5T2R2 415 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 HEPHL1Q6MZM0 1159 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 P4HA3Q7Z4N8 544 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 ZNF781Q8N8C0 355 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 NUDT10Q8NFP7 164 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 OR6K3Q8NGY3 331 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 B4GALNT2Q8NHY0 566 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 RAB3IL1Q8TBN0 382 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 AGR3Q8TD06 166 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 ADAMTS15Q8TE58 950 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 RNF128Q8TEB7 428 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 CHAC2Q8WUX2 184 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 FIG4Q92562 907 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 CDS1Q92903 461 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 TUBGCP3Q96CW5 907 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 NUDT11Q96G61 164 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 C16orf58Q96GQ5 468 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 ZNF845Q96IR2 970 aaPredicted RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 MARK4Q96L34 752 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 SORT1Q99523 831 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 PIP5K1AQ99755 562 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 FOXB1Q99853 325 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 C1orf50Q9BV19 199 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 PINK1Q9BXM7 581 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 PARD6BQ9BYG5 372 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 MEAF6Q9HAF1 191 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 FANCFQ9NPI8 374 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 POLE3Q9NRF9 147 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 PLSCR4Q9NRQ2 329 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 MED17Q9NVC6 651 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 ICAM5Q9UMF0 924 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 FAF1Q9UNN5 650 aaPredicted RBP5.48□□□□□ -1.53
PTPN20-208ENST00000395727 VDAC3Q9Y277 283 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 FREM3P0C091 2139 aa5.48□□□□□ -1.53
PTPN20-208ENST00000395727 TACC2O95359 2948 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 PRSS51A0A1B0GVH4 220 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 GJE1A6NN92 205 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 DEFB108AA8MXU0 73 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 H0YC42 278 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 SEC14L5O43304 696 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 ITM2AO43736 263 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 TMCC2O75069 709 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 C6orf47O95873 294 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 G6PDP11413 515 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 PSMB1P20618 241 aaKnown RBP5.47□□□□□ -1.53
PTPN20-208ENST00000395727 ATP6V1C1P21283 382 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 ME2P23368 584 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 UGT2B10P36537 528 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 RFX3P48380 749 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 SLC1A6P48664 564 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 AGFG1P52594 562 aaKnown RBP5.47□□□□□ -1.53
PTPN20-208ENST00000395727 TPD52P55327 224 aaPredicted RBP5.47□□□□□ -1.53
PTPN20-208ENST00000395727 SELENBP1Q13228 472 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 CASP8Q14790 479 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 CHI3L2Q15782 390 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 ZNF239Q16600 458 aaKnown RBP5.47□□□□□ -1.53
PTPN20-208ENST00000395727 ARHGAP11BQ3KRB8 267 aa5.47□□□□□ -1.53
PTPN20-208ENST00000395727 KRTAP21-3Q3LHN1 58 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms