RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PAGE3Q5JUK9 113 aa27.45■■□□□ 1.98
CMTM4-202ENST00000394106 VRK2Q86Y07 508 aa27.45■■□□□ 1.98
CMTM4-202ENST00000394106 CCDC106Q9BWC9 280 aa27.45■■□□□ 1.98
CMTM4-202ENST00000394106 C12orf49Q9H741 205 aa27.45■■□□□ 1.98
CMTM4-202ENST00000394106 SLC52A3Q9NQ40 469 aa27.45■■□□□ 1.98
CMTM4-202ENST00000394106 PLSCR4Q9NRQ2 329 aa27.45■■□□□ 1.98
CMTM4-202ENST00000394106 SLC25A37Q9NYZ2 338 aa27.45■■□□□ 1.98
CMTM4-202ENST00000394106 SLAMF8Q9P0V8 285 aa27.45■■□□□ 1.98
CMTM4-202ENST00000394106 DSPPQ9NZW4 1301 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 FAM221AA4D161 298 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 TFPIP10646 304 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 ENPP1P22413 925 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 RAC3P60763 192 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 RNPS1Q15287 305 aaKnown RBP27.44■■□□□ 1.98
CMTM4-202ENST00000394106 LRIF1Q5T3J3 769 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 GRINAQ7Z429 371 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 STON2Q8WXE9 905 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 RABEP2Q9H5N1 569 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 RLIMQ9NVW2 624 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 TMEM45AQ9NWC5 275 aa27.44■■□□□ 1.98
CMTM4-202ENST00000394106 SPIN1Q9Y657 262 aaPredicted RBP27.44■■□□□ 1.98
CMTM4-202ENST00000394106 A0A0G2JND7 137 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 CCNA2P20248 432 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 UGT2B10P36537 528 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 LIN52Q52LA3 116 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 SYT14P1Q58G82 188 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 TMEM201Q5SNT2 666 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 ZNF836Q6ZNA1 936 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 MSRB3Q8IXL7 192 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 SLC25A43Q8WUT9 341 aaPredicted RBP27.43■■□□□ 1.98
CMTM4-202ENST00000394106 MAL2Q969L2 176 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 KLHL4Q9C0H6 718 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 CACYBPQ9HB71 228 aaKnown RBP27.43■■□□□ 1.98
CMTM4-202ENST00000394106 KLHL28Q9NXS3 571 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 CHRNA9Q9UGM1 479 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 TRIM33Q9UPN9 1127 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 TESMINQ9Y4I5 508 aa27.43■■□□□ 1.98
CMTM4-202ENST00000394106 ANKRD17O75179 2603 aaKnown RBP27.43■■□□□ 1.98
CMTM4-202ENST00000394106 CFAP73A6NFT4 308 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 C16orf97H3BN30 126 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 CASKO14936 926 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 PRKD3O94806 890 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 PCYT1AP49585 367 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 FADDQ13158 208 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 CDC20BQ86Y33 519 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 TUSC5Q8IXB3 177 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 WFIKKN1Q96NZ8 548 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 SIKE1Q9BRV8 207 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 VAPAQ9P0L0 249 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 KLHL13Q9P2N7 655 aa27.42■■□□□ 1.98
CMTM4-202ENST00000394106 ZNF443Q9Y2A4 671 aaPredicted RBP27.42■■□□□ 1.98
CMTM4-202ENST00000394106 A0A0G2JPF8 293 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 HNRNPCL2B2RXH8 293 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 HNRNPCL3B7ZW38 293 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 HNRNPCL1O60812 293 aaKnown RBP27.41■■□□□ 1.98
CMTM4-202ENST00000394106 HNRNPCL4P0DMR1 293 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 UQCRBP14927 111 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 CCKARP32238 428 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 DIO1P49895 249 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 POU4F3Q15319 338 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 STK32CQ86UX6 486 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 DNAJA3Q96EY1 480 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 MED18Q9BUE0 208 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 A4GALTQ9NPC4 353 aa27.41■■□□□ 1.98
CMTM4-202ENST00000394106 NIPSNAP3AQ9UFN0 247 aaPredicted RBP27.41■■□□□ 1.98
CMTM4-202ENST00000394106 A0A1W2PP18 115 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 CDHR4A6H8M9 788 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 C5orf58C9J3I9 102 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 SULT2B1O00204 365 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 GKN3PP0CG01 181 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 KLK2P20151 261 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 EPS8Q12929 822 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 LARS2Q15031 903 aaKnown RBP27.4■■□□□ 1.98
CMTM4-202ENST00000394106 TMPPEQ6ZT21 453 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 ADGRG3Q86Y34 549 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 ZNF440Q8IYI8 595 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 SLC43A2Q8N370 569 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 OR11A1Q9GZK7 315 aa27.4■■□□□ 1.98
CMTM4-202ENST00000394106 TMED7-TICAM2A0A0A6YYA0 188 aa27.39■■□□□ 1.98
CMTM4-202ENST00000394106 SMAD9O15198 467 aaKnown RBP27.39■■□□□ 1.98
CMTM4-202ENST00000394106 FESP07332 822 aa27.39■■□□□ 1.98
CMTM4-202ENST00000394106 BMP2P12643 396 aa27.39■■□□□ 1.98
CMTM4-202ENST00000394106 PPIBP23284 216 aaKnown RBP27.39■■□□□ 1.98
CMTM4-202ENST00000394106 DNAJA1P31689 397 aaKnown RBP27.39■■□□□ 1.98
CMTM4-202ENST00000394106 HTR3AP46098 478 aa27.39■■□□□ 1.98
CMTM4-202ENST00000394106 CSNK2A1P68400 391 aaPredicted RBP27.39■■□□□ 1.98
CMTM4-202ENST00000394106 ANKRD34AQ69YU3 496 aa27.39■■□□□ 1.98
CMTM4-202ENST00000394106 ZNF550Q7Z398 422 aa27.39■■□□□ 1.98
CMTM4-202ENST00000394106 NUFIP2Q7Z417 695 aaKnown RBP27.39■■□□□ 1.98
CMTM4-202ENST00000394106 LSRQ86X29 649 aaPredicted RBP27.39■■□□□ 1.98
CMTM4-202ENST00000394106 LIME1Q9H400 295 aa27.39■■□□□ 1.98
CMTM4-202ENST00000394106 ZNF385DQ9H6B1 395 aa27.39■■□□□ 1.98
CMTM4-202ENST00000394106 ZNF232Q9UNY5 417 aa27.39■■□□□ 1.98
CMTM4-202ENST00000394106 TMED7Q9Y3B3 224 aa27.39■■□□□ 1.98
CMTM4-202ENST00000394106 YES1P07947 543 aa27.38■■□□□ 1.97
CMTM4-202ENST00000394106 THBS1P07996 1170 aa27.38■■□□□ 1.97
CMTM4-202ENST00000394106 TACR3P29371 465 aa27.38■■□□□ 1.97
CMTM4-202ENST00000394106 POLR2HP52434 150 aaKnown RBP27.38■■□□□ 1.97
CMTM4-202ENST00000394106 GCNT6Q5T4J0 391 aa27.38■■□□□ 1.97
CMTM4-202ENST00000394106 CLIP4Q8N3C7 705 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms