RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 RBM24Q9BX46 236 aaKnown RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 FAM107BQ9H098 131 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 RAD21L1Q9H4I0 556 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 C12orf49Q9H741 205 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 HHATLQ9HCP6 504 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 EXOSC3Q9NQT5 275 aaKnown RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 CRIM1Q9NZV1 1036 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 JKAMPQ9P055 326 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 KLHL14Q9P2G3 628 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 PACSIN3Q9UKS6 424 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 MCTS1Q9ULC4 181 aaKnown RBP6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 USP22Q9UPT9 525 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 TEX15Q9BXT5 2789 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 MAST4O15021 2626 aa6.86□□□□□ -1.31
HMGB3P1-201ENST00000393368 NUP214P35658 2090 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 PCNX3Q9H6A9 2034 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 TMED7-TICAM2A0A0A6YYA0 188 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 A0A0G2JPF8 293 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 LOC100653049A0A140TA62 436 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 TMEM72A0PK05 275 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZC3H12DA2A288 527 aaKnown RBP6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 TMEM247A6NEH6 219 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 A8MXE2 369 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 EVPLLA8MZ36 301 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 HNRNPCL2B2RXH8 293 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 HNRNPCL3B7ZW38 293 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 FXYD1O00168 92 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 TPST1O60507 370 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 HNRNPCL1O60812 293 aaKnown RBP6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 KRT34O76011 436 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 IL18BPO95998 194 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 CGAP01215 116 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 OPN1SWP03999 348 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 FESP07332 822 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 PABPC4LP0CB38 370 aaKnown RBP6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 HNRNPCL4P0DMR1 293 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 TFPIP10646 304 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 FCGR2AP12318 317 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 PTNP21246 168 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 TACR3P29371 465 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 CCKARP32238 428 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 ACAA2P42765 397 aaKnown RBP6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 MAGEA8P43361 318 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 KIR2DL3P43628 341 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 IRX1P78414 480 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 FAM27E3Q08E93 113 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 EPS8Q12929 822 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 BNIP2Q12982 314 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 SCARB2Q14108 478 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 GNA13Q14344 377 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 LARS2Q15031 903 aaKnown RBP6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 GUSBP1Q15486 140 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 CYP51A1Q16850 503 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 EXOC3L2Q2M3D2 409 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 SYT14P1Q58G82 188 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 RABL3Q5HYI8 236 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF311Q5JNZ3 666 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 RNF220Q5VTB9 566 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 METTL21CQ5VZV1 264 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 OR2A2Q6IF42 318 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 C3orf33Q6P1S2 294 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF474Q6S9Z5 364 aaPredicted RBP6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 GRINAQ7Z429 371 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 ADGRG3Q86Y34 549 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 PTOV1Q86YD1 416 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 CMIPQ8IY22 773 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 DPP10Q8N608 796 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF610Q8N9Z0 462 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 BBS10Q8TAM1 723 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 RNF128Q8TEB7 428 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 OIT3Q8WWZ8 545 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 TMEM234Q8WY98 164 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 NRGNQ92686 78 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZFP3Q96NJ6 502 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 ANKRD27Q96NW4 1050 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 WFDC6Q9BQY6 131 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF559Q9BR84 538 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 PRR14Q9BWN1 585 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 BCL2L10Q9HD36 194 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 TMEM45AQ9NWC5 275 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 CALML5Q9NZT1 146 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 STOML1Q9UBI4 398 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 OSGIN1Q9UJX0 560 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 TMED7Q9Y3B3 224 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 TACC2O95359 2948 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 APCP25054 2843 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 ITPR2Q14571 2701 aa6.85□□□□□ -1.31
HMGB3P1-201ENST00000393368 GJE1A6NN92 205 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 ZNF814B7Z6K7 855 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 SULT2B1O00204 365 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 MRASO14807 208 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 SMAD9O15198 467 aaKnown RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 RAMP1O60894 148 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 SS18L1O75177 396 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 THBS1P07996 1170 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 GPX2P18283 190 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 PPIBP23284 216 aaKnown RBP6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 EDNRAP25101 427 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 AGTR1P30556 359 aa6.84□□□□□ -1.31
HMGB3P1-201ENST00000393368 APOBEC1P41238 236 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms