RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 FAM155AB1AL88 458 aaPredicted RBP13.88□□□□□ -0.19
CCDC50-201ENST00000392455 KIAA0355O15063 1070 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 SLC16A6O15403 523 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 CES4AQ5XG92 561 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 RPS27LQ71UM5 84 aaKnown RBP13.88□□□□□ -0.19
CCDC50-201ENST00000392455 INTS14Q96SY0 518 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 RAB18Q9NP72 206 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 ETV7Q9Y603 341 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 ADAM23O75077 832 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 RPL22L1Q6P5R6 122 aaKnown RBP13.88□□□□□ -0.19
CCDC50-201ENST00000392455 TMEM151AQ8N4L1 468 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 ST6GALNAC5Q9BVH7 336 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 SCML1Q9UN30 329 aa13.88□□□□□ -0.19
CCDC50-201ENST00000392455 MON2Q7Z3U7 1717 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 SERPINA11Q86U17 422 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 LPAR4Q99677 370 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 NTPCRQ9BSD7 190 aaKnown RBP13.87□□□□□ -0.19
CCDC50-201ENST00000392455 WDR6Q9NNW5 1121 aaKnown RBP13.87□□□□□ -0.19
CCDC50-201ENST00000392455 HEATR5BQ9P2D3 2071 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 FBP1P09467 338 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 OR8U8P0C7N1 319 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 ACY1Q03154 408 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 CLDN19Q8N6F1 224 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 SFXN2Q96NB2 322 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 TMEM43Q9BTV4 400 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 WASH6PQ9NQA3 447 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 RBPJLQ9UBG7 517 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 SLC23A2Q9UGH3 650 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 TCRBV21S2A2A0A5A6 115 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 RPS5P46782 204 aaKnown RBP13.87□□□□□ -0.19
CCDC50-201ENST00000392455 CDK5Q00535 292 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 TAGLNQ01995 201 aaKnown RBP13.87□□□□□ -0.19
CCDC50-201ENST00000392455 RNLSQ5VYX0 342 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 FRMPD2BQ6IN97 320 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 SLC35F2Q8IXU6 374 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 HHLA2Q9UM44 414 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 BRWD1Q9NSI6 2320 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 PGBD5Q8N414 524 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 GALNT9Q9HCQ5 603 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 OR10J4P0C629 311 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 KCNAB2Q13303 367 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 CMPK2Q5EBM0 449 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 GRINAQ7Z429 371 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 THAP7Q9BT49 309 aaPredicted RBP13.87□□□□□ -0.19
CCDC50-201ENST00000392455 KCNK13Q9HB14 408 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 NLE1Q9NVX2 485 aaPredicted RBP13.87□□□□□ -0.19
CCDC50-201ENST00000392455 RARRES3Q9UL19 164 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 NFAT5O94916 1531 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 TIMP2P16035 220 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 PDE7AQ13946 482 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 DCAF4L2Q8NA75 395 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 CLEC1AQ8NC01 280 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 C2CD4AQ8NCU7 369 aaPredicted RBP13.87□□□□□ -0.19
CCDC50-201ENST00000392455 FCRL1Q96LA6 429 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 CDK5RAP2Q96SN8 1893 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 TRPM6Q9BX84 2022 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 DMAC2Q9NW81 257 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 NLKQ9UBE8 527 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 INSL5Q9Y5Q6 135 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 RNASEK-C17orf49H0YIS7 233 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 OSMP13725 252 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 PLCXD3Q63HM9 321 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC50-201ENST00000392455 C14orf119Q9NWQ9 140 aa13.87□□□□□ -0.19
CCDC50-201ENST00000392455 PUS1Q9Y606 427 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC50-201ENST00000392455 GSRP00390 522 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 Q1RN00 199 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 SPANXN4Q5MJ08 99 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 CNIH2Q6PI25 160 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 RELL2Q8NC24 303 aaPredicted RBP13.86□□□□□ -0.19
CCDC50-201ENST00000392455 OR14L1PQ8NHC6 308 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 PINK1Q9BXM7 581 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 PIGMQ9H3S5 423 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 MCRIP1C9JLW8 97 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 CYTIPO60759 359 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 FCER1GP30273 86 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 GGT5P36269 586 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 UBE2G1P62253 170 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF805Q5CZA5 627 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 ASRGL1Q7L266 308 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 A0A0D9SEW6 157 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 NKX6-3A6NJ46 265 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 FAM227AF5H4B4 570 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 CALCRP30988 508 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 RPS18P62269 152 aaKnown RBP13.86□□□□□ -0.19
CCDC50-201ENST00000392455 ENDOGQ14249 297 aaKnown RBP13.86□□□□□ -0.19
CCDC50-201ENST00000392455 TMEM97Q5BJF2 176 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 EMC10Q5UCC4 262 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 WDR88Q6ZMY6 472 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 CSNK1A1LQ8N752 337 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 GATSQ8NAP1 163 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 SYNPRQ8TBG9 265 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 SENP5Q96HI0 755 aaPredicted RBP13.86□□□□□ -0.19
CCDC50-201ENST00000392455 HRH4Q9H3N8 390 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 FBRSL1Q9HCM7 1045 aaKnown RBP13.86□□□□□ -0.19
CCDC50-201ENST00000392455 DYNLRB1Q9NP97 96 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 TMEM212A6NML5 194 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 OR1E2P47887 323 aa13.86□□□□□ -0.19
CCDC50-201ENST00000392455 SLC25A11Q02978 314 aaKnown RBP13.86□□□□□ -0.19
CCDC50-201ENST00000392455 ZNF91Q05481 1191 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms