RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 HMGN2P46Q86SG4 172 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 ADGRE4PQ86SQ3 457 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 FJX1Q86VR8 437 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 LACC1Q8IV20 430 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 LILRA2Q8N149 483 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 LSMEM1Q8N8F7 131 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 CLEC18CQ8NCF0 446 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 OR5M9Q8NGP3 310 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 POC1BQ8TC44 478 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 SLC25A43Q8WUT9 341 aaPredicted RBP6.1□□□□□ -1.43
UBBP1-201ENST00000392399 DNAJA4Q8WW22 397 aaPredicted RBP6.1□□□□□ -1.43
UBBP1-201ENST00000392399 LZICQ8WZA0 190 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 RND1Q92730 232 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 POP5Q969H6 163 aaKnown RBP6.1□□□□□ -1.43
UBBP1-201ENST00000392399 RNF145Q96MT1 663 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 ZFP3Q96NJ6 502 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 DMRTA2Q96SC8 542 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 CDRT15Q96T59 188 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 KCTD14Q9BQ13 255 aaPredicted RBP6.1□□□□□ -1.43
UBBP1-201ENST00000392399 ZNF559Q9BR84 538 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 TTYH2Q9BSA4 534 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 TRIM2Q9C040 744 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 ADAM19Q9H013 955 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 C12orf10Q9HB07 376 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 TIGARQ9NQ88 270 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 ADA2Q9NZK5 511 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 ERRFI1Q9UJM3 462 aaPredicted RBP6.1□□□□□ -1.43
UBBP1-201ENST00000392399 TINAGQ9UJW2 476 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 CHST2Q9Y4C5 530 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 DOPEY1Q5JWR5 2465 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 COL12A1Q99715 3063 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 MYO7BQ6PIF6 2116 aa6.1□□□□□ -1.43
UBBP1-201ENST00000392399 PCNX3Q9H6A9 2034 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 DIDO1Q9BTC0 2240 aaKnown RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 MBD3L4A6NDZ8 208 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 MBD3L3A6NE82 208 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 MBD3L5A6NJ08 208 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 H0Y3Z8 333 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 CXCR6O00574 342 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 DNPH1O43598 174 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 TPST1O60507 370 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 ADAM11O75078 769 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 BCAS1O75363 584 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 AGFG2O95081 481 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 IL2RAP01589 272 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 FESP07332 822 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 GKN3PP0CG01 181 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 PNMTP11086 282 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 CXCR1P25024 350 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 CPOXP36551 454 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 RNF144AP50876 292 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 ZNF136P52737 540 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 CLDN20P56880 219 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 CARD18P57730 90 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 RGS8P57771 180 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 SELENOWP63302 87 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 SLC25A3Q00325 362 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 SRYQ05066 204 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 PMPCAQ10713 525 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 FOXF1Q12946 379 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 SGCBQ16585 318 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 FXNQ16595 210 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 NRF1Q16656 503 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 ACSF3Q4G176 576 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 DCST1Q5T197 706 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 RIPPLY2Q5TAB7 128 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 GTF2IRD2BQ6EKJ0 949 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 GLYATQ6IB77 296 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 RTL6Q6ICC9 239 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 OR2A2Q6IF42 318 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 ULK3Q6PHR2 472 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 GTF2IRD2Q86UP8 949 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 GGNQ86UU5 652 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 RANBP3LQ86VV4 465 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 ADGRG3Q86Y34 549 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 DEFB107AQ8IZN7 70 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 SMYD1Q8NB12 490 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 RBM15BQ8NDT2 890 aaKnown RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 OR52E4Q8NGH9 312 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 OR5M1Q8NGP8 315 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 MBD3L2Q8NHZ7 208 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 SSC4DQ8WTU2 575 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 ASB5Q8WWX0 329 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 PROX1Q92786 737 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 TAMM41Q96BW9 452 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 DDIT4LQ96D03 193 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 KLHL15Q96M94 604 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 RAB3IPQ96QF0 476 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 TM9SF2Q99805 663 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 ARHGDIGQ99819 225 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 KLHDC3Q9BQ90 382 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 POLR2J2Q9GZM3 115 aaKnown RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 POLR2J3Q9H1A7 115 aaKnown RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 MMADHCQ9H3L0 296 aaPredicted RBP6.09□□□□□ -1.43
UBBP1-201ENST00000392399 GORASP2Q9H8Y8 452 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 TMEM27Q9HBJ8 222 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 ADPRHL2Q9NX46 363 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 TAS2R1Q9NYW7 299 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 COQ3Q9NZJ6 369 aa6.09□□□□□ -1.43
UBBP1-201ENST00000392399 TNFRSF10DQ9UBN6 386 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms