RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MFSD13AQ14CX5 517 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 TMEM200AQ86VY9 491 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 DOK1Q99704 481 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 NIPSNAP1Q9BPW8 284 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 IL21RQ9HBE5 538 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 PRTFDC1Q9NRG1 225 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 SLCO3A1Q9UIG8 710 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 WASF3Q9UPY6 502 aa18.43■□□□□ 0.54
SHANK1-203ENST00000391813 FEZF1A0PJY2 475 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 SNRPBP14678 240 aaKnown RBP18.42■□□□□ 0.54
SHANK1-203ENST00000391813 RAB6AP20340 208 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 VEGFCP49767 419 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 ARHGAP40Q5TG30 622 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 NXNL2Q5VZ03 156 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 HTR3DQ70Z44 454 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 MAMDC2Q7Z304 686 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-203ENST00000391813 L3MBTL4Q8NA19 623 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 MALSU1Q96EH3 234 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 TEX37Q96LM6 180 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 STRADBQ9C0K7 418 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF281Q9Y2X9 895 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 CACNA1SQ13698 1873 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 TCRBV5S2A0A599 114 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 SLC9B1P1A6NJY1 282 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 H0YIV9 168 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 KCNJ13O60928 360 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 EDN1P05305 212 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 GIPP09681 153 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-203ENST00000391813 AOAHP28039 575 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 GALK2Q01415 458 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 BPIFB2Q8N4F0 458 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 OR4M1Q8NGD0 313 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 OR52I1Q8NGK6 324 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 MRPL38Q96DV4 380 aaKnown RBP18.42■□□□□ 0.54
SHANK1-203ENST00000391813 B3GAT2Q9NPZ5 323 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 C5AR2Q9P296 337 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 IER3IP1Q9Y5U9 82 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 FAM183AA6NL82 134 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 H3BUI4 141 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 PGCP20142 388 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 TDHQ8IZJ6 230 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 TTC9BQ8N6N2 239 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 DNAAF1Q8NEP3 725 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 TMEM38AQ9H6F2 299 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 SEMA4GQ9NTN9 838 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 LSM5Q9Y4Y9 91 aaKnown RBP18.42■□□□□ 0.54
SHANK1-203ENST00000391813 USP3Q9Y6I4 520 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF860A6NHJ4 632 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 FBXO45P0C2W1 286 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 HOXC13P31276 330 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 CTF1Q16619 201 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 C18orf63Q68DL7 685 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 AWAT2Q6E213 333 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 KHSRPQ92945 711 aaKnown RBP eCLIP18.42■□□□□ 0.54
SHANK1-203ENST00000391813 LRRC46Q96FV0 321 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 C16orf58Q96GQ5 468 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 TMEM43Q9BTV4 400 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 PARPBPQ9NWS1 579 aa18.42■□□□□ 0.54
SHANK1-203ENST00000391813 A0A1B0GV50 99 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 TAS2R20P59543 309 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 GPR176Q14439 515 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 CLPPQ16740 277 aaPredicted RBP18.41■□□□□ 0.54
SHANK1-203ENST00000391813 DUSP7Q16829 419 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 C3orf33Q6P1S2 294 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 GRAMD2AQ8IUY3 354 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 VN1R2Q8NFZ6 395 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 UBE2FQ969M7 185 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 LURAP1Q96LR2 239 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 ARPC5LQ9BPX5 153 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 GABARAPL3Q9BY60 117 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 ERVMER34-1Q9H9K5 563 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 ABCA3Q99758 1704 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 ATP1B1P05026 303 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 PHF19Q5T6S3 580 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 PIP5KL1Q5T9C9 394 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 SAXO2Q658L1 398 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 PAPD4Q6PIY7 484 aaKnown RBP18.41■□□□□ 0.54
SHANK1-203ENST00000391813 SSX9Q7RTT3 188 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 NRIP3Q9NQ35 241 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 LINC01553A4QN01 128 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 FXYD1O00168 92 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 FRS3O43559 492 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 CEBPBP17676 345 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 SHC1P29353 583 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 AFF3P51826 1226 aaKnown RBP18.41■□□□□ 0.54
SHANK1-203ENST00000391813 PDX1P52945 283 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 RIMKLAQ8IXN7 391 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 LAS2Q8IYD9 372 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 RNF113BQ8IZP6 322 aaKnown RBP18.41■□□□□ 0.54
SHANK1-203ENST00000391813 BMFQ96LC9 184 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 C20orf85Q9H1P6 137 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 ADRB1P08588 477 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 FOSL1P15407 271 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 EMP3P54852 163 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 SLC26A5P58743 744 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 ZNF619Q8N2I2 560 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 IL17RDQ8NFM7 739 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 ABHD4Q8TB40 342 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 OR8D2Q9GZM6 311 aa18.41■□□□□ 0.54
SHANK1-203ENST00000391813 NELFAQ9H3P2 528 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms